BLASTX nr result

ID: Coptis21_contig00032748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032748
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   167   9e-40
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   166   2e-39
ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
gb|ABD65133.1| hypothetical protein 40.t00008 [Brassica oleracea]     163   2e-38
emb|CBI31915.3| unnamed protein product [Vitis vinifera]              162   5e-38

>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  167 bits (424), Expect = 9e-40
 Identities = 77/163 (47%), Positives = 114/163 (69%)
 Frame = +1

Query: 79  ELDDAKYSLPVPVIGLYITTASLVCLVAMLYDIVSRFRHRKRWIPCRLFSLNSVTLTLLS 258
           +L+DA++S P+P+IG+Y+  ASL+C +AM  D++  FRHRK W PC+ FSLN+ +LT ++
Sbjct: 11  DLNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIA 70

Query: 259 ATAKLPVDLTTPMPSALDQISKLTATTLICISMGFFMPSLGANQKSECLTNMAALSILVV 438
              KL VDL T MPS  DQ++KL++T  +C  MG  MPSLG    ++ L N+ AL ILV+
Sbjct: 71  VGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVI 130

Query: 439 TVVVKICIQINTGVIFMFKTEYIIIMCCMLVLLFLTWFSAVII 567
           T VV ICIQ+ TG I++F  E+ +++  ML++L +  FSA  +
Sbjct: 131 TDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTV 173


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  166 bits (421), Expect = 2e-39
 Identities = 77/163 (47%), Positives = 113/163 (69%)
 Frame = +1

Query: 79  ELDDAKYSLPVPVIGLYITTASLVCLVAMLYDIVSRFRHRKRWIPCRLFSLNSVTLTLLS 258
           +L+DA++S P+P IG+Y+  ASL+C +AM  D++  FRHRK W PC+ FSLN+ +LT ++
Sbjct: 11  DLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIA 70

Query: 259 ATAKLPVDLTTPMPSALDQISKLTATTLICISMGFFMPSLGANQKSECLTNMAALSILVV 438
              KL VDL T MPS  DQ++KL++T  +C  MG  MPSLG    ++ L N+ AL ILV+
Sbjct: 71  VGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVI 130

Query: 439 TVVVKICIQINTGVIFMFKTEYIIIMCCMLVLLFLTWFSAVII 567
           T VV ICIQ+ TG I++F  E+ +++  ML++L +  FSA  +
Sbjct: 131 TDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTV 173


>ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|222840939|gb|EEE78486.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  164 bits (414), Expect = 1e-38
 Identities = 83/171 (48%), Positives = 116/171 (67%), Gaps = 1/171 (0%)
 Frame = +1

Query: 58  KHGC-VKIELDDAKYSLPVPVIGLYITTASLVCLVAMLYDIVSRFRHRKRWIPCRLFSLN 234
           K GC +   L++AK+S P+P IGLYI  ASL C +AM  D +  FR RK W P + FS+N
Sbjct: 3   KLGCGIDGNLNEAKFSEPMPWIGLYIAAASLACALAMAVDFIRGFRRRKFWFPSKYFSIN 62

Query: 235 SVTLTLLSATAKLPVDLTTPMPSALDQISKLTATTLICISMGFFMPSLGANQKSECLTNM 414
           + +LT+++   KL VDL T MP  +DQ++KL++  L+C  MG  MPSLGA   S+  TNM
Sbjct: 63  ATSLTIIAVAVKLSVDLNTAMPRRVDQLAKLSSGALLCTVMGNSMPSLGAMDNSDLCTNM 122

Query: 415 AALSILVVTVVVKICIQINTGVIFMFKTEYIIIMCCMLVLLFLTWFSAVII 567
            AL ILV+TV+V I IQ+ TGVI+++  E++ IM  ML+LL +  FSA+ +
Sbjct: 123 IALGILVITVIVNIGIQLGTGVIYLYWKEHVFIMFLMLILLLILSFSALTV 173


>gb|ABD65133.1| hypothetical protein 40.t00008 [Brassica oleracea]
          Length = 742

 Score =  163 bits (413), Expect = 2e-38
 Identities = 80/171 (46%), Positives = 111/171 (64%)
 Frame = +1

Query: 55  EKHGCVKIELDDAKYSLPVPVIGLYITTASLVCLVAMLYDIVSRFRHRKRWIPCRLFSLN 234
           + HG     L DA++S P+P IG+Y+ TASL+C  AM  D++  FRHRK W PC+ FSLN
Sbjct: 4   DSHG----NLTDAEFSKPLPSIGIYVATASLICGAAMFADLLHAFRHRKYWFPCKYFSLN 59

Query: 235 SVTLTLLSATAKLPVDLTTPMPSALDQISKLTATTLICISMGFFMPSLGANQKSECLTNM 414
           + TLT +S   KL +DL TPMPS  DQ++KL+++   C+ M   MPSLG     + L N+
Sbjct: 60  ATTLTFISVCVKLSLDLNTPMPSRQDQLAKLSSSVFFCVVMANSMPSLGFMVTRDLLMNL 119

Query: 415 AALSILVVTVVVKICIQINTGVIFMFKTEYIIIMCCMLVLLFLTWFSAVII 567
            AL ILVVT V  ICIQ+ TG I++F  E+ ++   ML++  +  FSA+ I
Sbjct: 120 VALGILVVTDVANICIQLGTGAIYVFTREHALVTVLMLLVFMILSFSAIAI 170


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  162 bits (409), Expect = 5e-38
 Identities = 76/169 (44%), Positives = 116/169 (68%), Gaps = 1/169 (0%)
 Frame = +1

Query: 64  GC-VKIELDDAKYSLPVPVIGLYITTASLVCLVAMLYDIVSRFRHRKRWIPCRLFSLNSV 240
           GC +   ++D+ ++ P+P IG+Y+  ASLVC +AM  D     RH+K W PC+ FSLN+ 
Sbjct: 5   GCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNAT 64

Query: 241 TLTLLSATAKLPVDLTTPMPSALDQISKLTATTLICISMGFFMPSLGANQKSECLTNMAA 420
           +LT+++   KL VDL T MP   DQ+SKL++T ++C  MG FMPS+G  +  E  +N+ A
Sbjct: 65  SLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIA 124

Query: 421 LSILVVTVVVKICIQINTGVIFMFKTEYIIIMCCMLVLLFLTWFSAVII 567
           L ILV+T++V +CIQ+ TGVI+++  E+ ++M  MLVLL +  FSA+ +
Sbjct: 125 LGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTV 173


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