BLASTX nr result

ID: Coptis21_contig00032745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032745
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262...   119   3e-25
emb|CBI20741.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262...   119   3e-25
emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]   119   3e-25
ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354...   109   3e-22

>ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis
           vinifera]
          Length = 551

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   EHALKHGLRNGLYVVTLGWFVDSVRKNVRLSESLYSVKSAGENGLN-TKLNRLVRVNDTE 178
           +HALKHG +NGL+VVTLGWFVDSVR+NVRLSESLY VK+ GENG+   +LNRL+  +  E
Sbjct: 112 DHALKHGSKNGLFVVTLGWFVDSVRRNVRLSESLYYVKNVGENGVRMDELNRLIGFSGAE 171

Query: 179 NSCLPVGLREDTKHSNRTQQAQLLFSGKESGTRADLVLSVKSI 307
           NSCLP G+ E+ K S  T+   L FSG+ES    D  LS  S+
Sbjct: 172 NSCLPAGMFENAKQSVMTEDPHLWFSGRESKRSVDSTLSGHSM 214


>emb|CBI20741.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   EHALKHGLRNGLYVVTLGWFVDSVRKNVRLSESLYSVKSAGENGLN-TKLNRLVRVNDTE 178
           +HALKHG +NGL+VVTLGWFVDSVR+NVRLSESLY VK+ GENG+   +LNRL+  +  E
Sbjct: 24  DHALKHGSKNGLFVVTLGWFVDSVRRNVRLSESLYYVKNVGENGVRMDELNRLIGFSGAE 83

Query: 179 NSCLPVGLREDTKHSNRTQQAQLLFSGKESGTRADLVLSVKSI 307
           NSCLP G+ E+ K S  T+   L FSG+ES    D  LS  S+
Sbjct: 84  NSCLPAGMFENAKQSVMTEDPHLWFSGRESKRSVDSTLSGHSM 126


>ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis
           vinifera]
          Length = 546

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   EHALKHGLRNGLYVVTLGWFVDSVRKNVRLSESLYSVKSAGENGLN-TKLNRLVRVNDTE 178
           +HALKHG +NGL+VVTLGWFVDSVR+NVRLSESLY VK+ GENG+   +LNRL+  +  E
Sbjct: 107 DHALKHGSKNGLFVVTLGWFVDSVRRNVRLSESLYYVKNVGENGVRMDELNRLIGFSGAE 166

Query: 179 NSCLPVGLREDTKHSNRTQQAQLLFSGKESGTRADLVLSVKSI 307
           NSCLP G+ E+ K S  T+   L FSG+ES    D  LS  S+
Sbjct: 167 NSCLPAGMFENAKQSVMTEDPHLWFSGRESKRSVDSTLSGHSM 209


>emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]
          Length = 565

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   EHALKHGLRNGLYVVTLGWFVDSVRKNVRLSESLYSVKSAGENGLN-TKLNRLVRVNDTE 178
           +HALKHG +NGL+VVTLGWFVDSVR+NVRLSESLY VK+ GENG+   +LNRL+  +  E
Sbjct: 126 DHALKHGSKNGLFVVTLGWFVDSVRRNVRLSESLYYVKNVGENGVRMDELNRLIGFSGAE 185

Query: 179 NSCLPVGLREDTKHSNRTQQAQLLFSGKESGTRADLVLSVKSI 307
           NSCLP G+ E+ K S  T+   L FSG+ES    D  LS  S+
Sbjct: 186 NSCLPAGMFENAKQSVMTEDPHLWFSGRESKRSVDSTLSGHSM 228


>ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1|
           topbp1, putative [Ricinus communis]
          Length = 556

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/103 (57%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   EHALKHGLRNGLYVVTLGWFVDSVRKNVRLSESLYSVKSAGENGLN-TKLNRLVRVNDTE 178
           EHALKHG +NGL+VVT+GWFVDSVR+NVRLSESLYSVKS GE  +    LNRLV +N TE
Sbjct: 119 EHALKHGSKNGLFVVTIGWFVDSVRRNVRLSESLYSVKSVGETDVRLDDLNRLVGINGTE 178

Query: 179 NSCLPVGLREDTKHSNRTQQAQLLFSGKESGTRADLVLSVKSI 307
           NSCLPVG+  D K  +  +      S + S    D  LS  S+
Sbjct: 179 NSCLPVGI-NDAKKFDAIEGLHKRLSARSSNRNIDSTLSGSSM 220


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