BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032711
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38550.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]   139   2e-31
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...   127   1e-27
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/106 (64%), Positives = 87/106 (82%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           +SRGLE NN+++D  VN+L++  R+EEA+ELFKDMM RGLLPD VNYTS+MDG FKAGKE
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGMK 319
           + A  +A+EM  K+  FDVVAYNV INGL KLGK+ E++S +TGM+
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/87 (33%), Positives = 50/87 (57%)
 Frame = +2

Query: 47  VNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNL 226
           +N L K  ++EEA+ +F++M   G++P+  +Y +L+D LFK G    A  +   M  + +
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 227 EFDVVAYNVFINGLLKLGKFEEAQSIY 307
            FDVV Y   ++GL K G    A+ ++
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMF 215



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           E + +  N  +    V+   K+  + EA ++ + M+ R +LP+   Y +L+DG FKA + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGM 316
             AL + +EM  + LE +    + F+N L + G+ EEA  ++  M
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +2

Query: 83  AEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNLEFDVVAYNVFIN 262
           A++L  ++ L  L P+ + YT+L+D   K+     AL + +EM  K+L  DVV Y   +N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 263 GLLKLGKFEEAQSIYTGMK 319
           GL K GK EEA+S++  M+
Sbjct: 131 GLCKSGKVEEAKSVFREME 149


>ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/106 (64%), Positives = 87/106 (82%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           +SRGLE NN+++D  VN+L++  R+EEA+ELFKDMM RGLLPD VNYTS+MDG FKAGKE
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGMK 319
           + A  +A+EM  K+  FDVVAYNV INGL KLGK+ E++S +TGM+
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/87 (33%), Positives = 50/87 (57%)
 Frame = +2

Query: 47  VNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNL 226
           +N L K  ++EEA+ +F++M   G++P+  +Y +L+D LFK G    A  +   M  + +
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 227 EFDVVAYNVFINGLLKLGKFEEAQSIY 307
            FDVV Y   ++GL K G    A+ ++
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMF 215



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           E + +  N  +    V+   K+  + EA ++ + M+ R +LP+   Y +L+DG FKA + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGM 316
             AL + +EM  + LE +    + F+N L + G+ EEA  ++  M
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +2

Query: 83  AEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNLEFDVVAYNVFIN 262
           A++L  ++ L  L P+ + YT+L+D   K+     AL + +EM  K+L  DVV Y   +N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 263 GLLKLGKFEEAQSIYTGMK 319
           GL K GK EEA+S++  M+
Sbjct: 131 GLCKSGKVEEAKSVFREME 149


>emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/106 (64%), Positives = 87/106 (82%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           +SRGLE NN+++D  VN+L++  R+EEA+ELFKDMM RGLLPD VNYTS+MDG FKAGKE
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGMK 319
           + A  +A+EM  K+  FDVVAYNV INGL KLGK+ E++S +TGM+
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/87 (33%), Positives = 50/87 (57%)
 Frame = +2

Query: 47  VNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNL 226
           +N L K  ++EEA+ +F++M   G++P+  +Y +L+D LFK G    A  +   M  + +
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 227 EFDVVAYNVFINGLLKLGKFEEAQSIY 307
            FDVV Y   ++GL K G    A+ ++
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMF 215



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           E + +  N  +    V+   K+  + EA ++ + M+ R +LP+   Y +L+DG FKA + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGM 316
             AL + +EM  + LE +    + F+N L + G+ EEA  ++  M
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +2

Query: 83  AEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNLEFDVVAYNVFIN 262
           A++L  ++ L  L P+ + YT+L+D   K+     AL + +EM  K+L  DVV Y   +N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 263 GLLKLGKFEEAQSIYTGMK 319
           GL K GK EEA+S++  M+
Sbjct: 131 GLCKSGKVEEAKSVFREME 149


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score =  127 bits (319), Expect = 1e-27
 Identities = 63/102 (61%), Positives = 82/102 (80%)
 Frame = +2

Query: 11  GLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAA 190
           GL+ NN + D+ VN+L++ +R++EAEEL KD+  RGLL D VNYTSLMDG FKAGKE+AA
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 191 LKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGM 316
           L + EEM  K++ FDVV YNV INGLL+ GK+ EA+S+Y+GM
Sbjct: 538 LNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGM 578



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/90 (34%), Positives = 51/90 (56%)
 Frame = +2

Query: 47  VNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNL 226
           VN L K  R+ EA+EL ++M   G+ P+ V YT+L+D LFKAG    A     ++  + +
Sbjct: 280 VNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339

Query: 227 EFDVVAYNVFINGLLKLGKFEEAQSIYTGM 316
             D+V     ++GL K  K +EA+ ++  +
Sbjct: 340 TLDLVMCTTLVDGLFKSSKPKEAEDMFRAL 369



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/98 (32%), Positives = 56/98 (57%)
 Frame = +2

Query: 2   ESRGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKE 181
           ++  LEA+       ++   K+  +EEA  L+++M++ G LPD V Y+S+++GL K G+ 
Sbjct: 230 DNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289

Query: 182 TAALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEA 295
           + A ++  EM    ++ + VAY   I+ L K G   EA
Sbjct: 290 SEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEA 327



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/103 (30%), Positives = 56/103 (54%)
 Frame = +2

Query: 8   RGLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETA 187
           RG+  +  +    V+ L K  + +EAE++F+ +    L+P+ + YT+L+DG  K G    
Sbjct: 337 RGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMER 396

Query: 188 ALKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGM 316
              + +EM  K++  +V+ Y+  ING  K G  +EA ++   M
Sbjct: 397 VESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/73 (34%), Positives = 45/73 (61%)
 Frame = +2

Query: 86  EELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNLEFDVVAYNVFING 265
           E +  +++  G   D + + +L+DG  KAG+ + AL + E M  + L  D+V+YN  ING
Sbjct: 132 ERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLING 191

Query: 266 LLKLGKFEEAQSI 304
             K G++++A+S+
Sbjct: 192 FCKRGEYDKAKSL 204


>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/103 (57%), Positives = 84/103 (81%)
 Frame = +2

Query: 11  GLEANNYILDIRVNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAA 190
           GLE N++I+D  +N+L++ +++EEAE L K MM +GLL D VNYTSLMDG FK G+E+AA
Sbjct: 396 GLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAA 455

Query: 191 LKVAEEMAHKNLEFDVVAYNVFINGLLKLGKFEEAQSIYTGMK 319
             +AE+MA   ++FDVVAYNV INGLL+LGK+ +A+S+Y+G++
Sbjct: 456 FTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIR 497



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = +2

Query: 47  VNDLRKRQRIEEAEELFKDMMLRGLLPDCVNYTSLMDGLFKAGKETAALKVAEEMAHKNL 226
           +N L KR  + EA+ L ++M   G+ P+ V Y  L+D LFKAG    +     +M    +
Sbjct: 198 INGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGV 257

Query: 227 EFDVVAYNVFINGLLKLGKFEEAQSIY 307
            FD+V     I+GL K GK +EA++++
Sbjct: 258 SFDLVVCTTLIDGLFKAGKSDEAEAMF 284