BLASTX nr result

ID: Coptis21_contig00032705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032705
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...    59   7e-07
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...    56   6e-06

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +1

Query: 448 FDTSMALTVLVILTALFFMGFFSVYLRRYGGDSPIE 555
           FD+SMALTV+V+LTALFFMGFFSVY+RR+  D+ +E
Sbjct: 52  FDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVE 87


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +1

Query: 448 FDTSMALTVLVILTALFFMGFFSVYLRRYGGDSPIEF 558
           FD+SMALTVLV+L+ALFFMGFFS+Y+RR+  +   EF
Sbjct: 46  FDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEF 82


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