BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032688
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   447   e-123
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              447   e-123
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   424   e-116
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   409   e-112
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   409   e-112

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  447 bits (1149), Expect = e-123
 Identities = 231/367 (62%), Positives = 278/367 (75%)
 Frame = -1

Query: 1102 LKEKLGSCRSKFDDLLVNKQSSLPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCA 923
            LK KL S  SKFD+LL+N Q S  +QYKD D+  KALRK+L + HAKIL+CLD LG +CA
Sbjct: 270  LKAKLKSSWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICA 329

Query: 922  YEAAKVCAETARSNSKDECELYRNSFVLCRDFLEDVLHIFEESLPHDYEHFFNMGFDHLK 743
            YEA KVC E   SN+++E E YR S   C+ FL++VL I    LPH   ++ N   D LK
Sbjct: 330  YEAVKVCIENV-SNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILK 388

Query: 742  AITMGYISPKLYELVQIFQLLGGSRELRCLIFVERIIAAKVIERFMRKVSFLSHLTVSYL 563
            A+  GYI+PKL+EL+Q+FQ  G +R++ CLIFVERII AKVIERF++K+ +LSH TVSYL
Sbjct: 389  AVDKGYITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYL 448

Query: 562  TGGGASVDALTRTMQKKTLESFRCGKVNLLFTTDVSEEGIDVPSCSCVIRFDLPKTVRSY 383
            TG  +SVDAL    Q++TLESFR GKVNLLF TDV EEGI VP+CSCVIRFDLPKTVRSY
Sbjct: 449  TGSNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSY 508

Query: 382  VQSRGRARQNGSRYILMLERGNIEQRDMLYDLIRSEHSMTDSALTRDPNACISKVCDIEE 203
            VQSRGRARQ+ S++I+MLERGN EQRD L+D+IRSE+SMTD+A  RDP+    K   IEE
Sbjct: 509  VQSRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEE 568

Query: 202  PVMYVVRSTGALVTADSCVNLIFRYCEKLPGDMYFTPKPKFQMILSKGLYECELTLPPSA 23
               Y V STGA VTADS V+LI RYCEKLPGD YFTPKP F     +G+YEC+LTLPP+A
Sbjct: 569  MDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNA 628

Query: 22   PIQKLIG 2
              Q +IG
Sbjct: 629  AFQTIIG 635


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  447 bits (1149), Expect = e-123
 Identities = 231/367 (62%), Positives = 278/367 (75%)
 Frame = -1

Query: 1102 LKEKLGSCRSKFDDLLVNKQSSLPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCA 923
            LK KL S  SKFD+LL+N Q S  +QYKD D+  KALRK+L + HAKIL+CLD LG +CA
Sbjct: 278  LKAKLKSSWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICA 337

Query: 922  YEAAKVCAETARSNSKDECELYRNSFVLCRDFLEDVLHIFEESLPHDYEHFFNMGFDHLK 743
            YEA KVC E   SN+++E E YR S   C+ FL++VL I    LPH   ++ N   D LK
Sbjct: 338  YEAVKVCIENV-SNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILK 396

Query: 742  AITMGYISPKLYELVQIFQLLGGSRELRCLIFVERIIAAKVIERFMRKVSFLSHLTVSYL 563
            A+  GYI+PKL+EL+Q+FQ  G +R++ CLIFVERII AKVIERF++K+ +LSH TVSYL
Sbjct: 397  AVDKGYITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYL 456

Query: 562  TGGGASVDALTRTMQKKTLESFRCGKVNLLFTTDVSEEGIDVPSCSCVIRFDLPKTVRSY 383
            TG  +SVDAL    Q++TLESFR GKVNLLF TDV EEGI VP+CSCVIRFDLPKTVRSY
Sbjct: 457  TGSNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSY 516

Query: 382  VQSRGRARQNGSRYILMLERGNIEQRDMLYDLIRSEHSMTDSALTRDPNACISKVCDIEE 203
            VQSRGRARQ+ S++I+MLERGN EQRD L+D+IRSE+SMTD+A  RDP+    K   IEE
Sbjct: 517  VQSRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEE 576

Query: 202  PVMYVVRSTGALVTADSCVNLIFRYCEKLPGDMYFTPKPKFQMILSKGLYECELTLPPSA 23
               Y V STGA VTADS V+LI RYCEKLPGD YFTPKP F     +G+YEC+LTLPP+A
Sbjct: 577  MDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNA 636

Query: 22   PIQKLIG 2
              Q +IG
Sbjct: 637  AFQTIIG 643


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  424 bits (1091), Expect = e-116
 Identities = 217/369 (58%), Positives = 277/369 (75%), Gaps = 2/369 (0%)
 Frame = -1

Query: 1102 LKEKLGSCRSKFDDLLVNKQSSLPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCA 923
            LK K+ +   K D  L N QSSL + +KD D+  K LRK+L + HAK+LHCLD LG +CA
Sbjct: 269  LKAKVEASWLKTDGSLSNLQSSLQTSHKDMDDKLKNLRKRLSNDHAKVLHCLDNLGLICA 328

Query: 922  YEAAKVCAETARSNSKDECELYRNSFVLCRDFLEDVLHIFEESLPHDYEHFFNMGFDHLK 743
            YEA  +C E     + +E + YR S +  ++FLE+V     ESLP   ++F N GFD+LK
Sbjct: 329  YEAVNICLENILDTT-EESKAYRESVLQYKNFLEEVQCRIGESLPLGDKNFLNSGFDYLK 387

Query: 742  AITMGYISPKLYELVQIFQLLGGSRELRCLIFVERIIAAKVIERFMRKVSFLSHLTVSYL 563
            A+ +GYISPKL+EL+Q+FQ  G +R++ CLIFVERII AKVIERF +KVS LSH  VSY+
Sbjct: 388  AVDLGYISPKLHELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYM 447

Query: 562  TGGGASVDALTRTMQKKTLESFRCGKVNLLFTTDVSEEGIDVPSCSCVIRFDLPKTVRSY 383
            TG   SVD+L   +QK+TLESFR GKVNLLFTTDV EEGI VP+C  VIRFDLPKTVRSY
Sbjct: 448  TGSNTSVDSLAPKIQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSY 507

Query: 382  VQSRGRARQNGSRYILMLERGNIEQRDMLYDLIRSEHSMTDSALTRDPNA--CISKVCDI 209
            VQSRGRARQN S +I+MLERGN++QR+ LYD+IRSE+SMT+SA+ RDP++  C+ K    
Sbjct: 508  VQSRGRARQNNSEFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTF 567

Query: 208  EEPVMYVVRSTGALVTADSCVNLIFRYCEKLPGDMYFTPKPKFQMILSKGLYECELTLPP 29
            EE  +++V +TGA VTADS V+LI +YC KLPGD Y+TPKP FQ   S+GLY+C+LTLP 
Sbjct: 568  EETNVFIVDATGASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPV 627

Query: 28   SAPIQKLIG 2
            +A +Q ++G
Sbjct: 628  NAAVQTIVG 636


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  409 bits (1051), Expect = e-112
 Identities = 208/367 (56%), Positives = 272/367 (74%)
 Frame = -1

Query: 1102 LKEKLGSCRSKFDDLLVNKQSSLPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCA 923
            LK K+ +   KFD  L N Q ++   YKD D   KAL+K+L S H KI +CLD LG +CA
Sbjct: 263  LKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGIMCA 322

Query: 922  YEAAKVCAETARSNSKDECELYRNSFVLCRDFLEDVLHIFEESLPHDYEHFFNMGFDHLK 743
            YEA KV  E   S   +E ++YR SF+  + FLE+ L +  ESL  + E+   +GFD  K
Sbjct: 323  YEAIKVLFENV-SVPNEESDVYRESFLQYKHFLEEALLVIGESLSLENENVPTLGFDLWK 381

Query: 742  AITMGYISPKLYELVQIFQLLGGSRELRCLIFVERIIAAKVIERFMRKVSFLSHLTVSYL 563
            A+ +GYISPKL+EL+Q+F+  G SR++ CLIFVERIIAA VIER ++KV  LSH TVSY+
Sbjct: 382  AVELGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANVIERIVKKVENLSHFTVSYV 441

Query: 562  TGGGASVDALTRTMQKKTLESFRCGKVNLLFTTDVSEEGIDVPSCSCVIRFDLPKTVRSY 383
            TG  ASV AL   +QK+TLE F  GK+NLLF+TDV EEG+ VP+CS V+RFDLPKTVRSY
Sbjct: 442  TGCNASVGALAPKVQKETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSY 501

Query: 382  VQSRGRARQNGSRYILMLERGNIEQRDMLYDLIRSEHSMTDSALTRDPNACISKVCDIEE 203
            VQSRGRARQN S+YIL+LERGN++QR +L+D+IRS+ SMTD+A++RD +AC+ K   + E
Sbjct: 502  VQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLME 561

Query: 202  PVMYVVRSTGALVTADSCVNLIFRYCEKLPGDMYFTPKPKFQMILSKGLYECELTLPPSA 23
               Y+V +TGA VTADS V L+++YC+KLPGD YF+PKP FQ+   +G YEC+LTLPP+A
Sbjct: 562  TDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLSYGEGSYECQLTLPPTA 621

Query: 22   PIQKLIG 2
             +Q ++G
Sbjct: 622  ALQTIVG 628


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  409 bits (1050), Expect = e-112
 Identities = 208/367 (56%), Positives = 272/367 (74%)
 Frame = -1

Query: 1102 LKEKLGSCRSKFDDLLVNKQSSLPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCA 923
            LK K+ +   KFD  L N Q ++   YKD D   KAL+K+L S H KI +CLD LG +CA
Sbjct: 263  LKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGIMCA 322

Query: 922  YEAAKVCAETARSNSKDECELYRNSFVLCRDFLEDVLHIFEESLPHDYEHFFNMGFDHLK 743
            YEA KV  E   S   +E ++YR SF+  + FLE+ L +  ESL  + E+   +GFD  K
Sbjct: 323  YEAIKVLFENV-SVPNEESDVYRESFLQYKHFLEEALLVIGESLSLENENVPTLGFDLWK 381

Query: 742  AITMGYISPKLYELVQIFQLLGGSRELRCLIFVERIIAAKVIERFMRKVSFLSHLTVSYL 563
            A+ +GYISPKL+EL+Q+F+  G SR++ CLIFVERIIAA VIER ++KV  LSH TVSY+
Sbjct: 382  AVELGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANVIERIVKKVENLSHFTVSYV 441

Query: 562  TGGGASVDALTRTMQKKTLESFRCGKVNLLFTTDVSEEGIDVPSCSCVIRFDLPKTVRSY 383
            TG  ASV AL   +QK+TLE F  GK+NLLF+TDV EEG+ VP+CS V+RFDLPKTVRSY
Sbjct: 442  TGCDASVGALAPKVQKETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSY 501

Query: 382  VQSRGRARQNGSRYILMLERGNIEQRDMLYDLIRSEHSMTDSALTRDPNACISKVCDIEE 203
            VQSRGRARQN S+YIL+LERGN++QR +L+D+IRS+ SMTD+A++RD +AC+ K   + E
Sbjct: 502  VQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLME 561

Query: 202  PVMYVVRSTGALVTADSCVNLIFRYCEKLPGDMYFTPKPKFQMILSKGLYECELTLPPSA 23
               Y+V +TGA VTADS V L+++YC+KLPGD YF+PKP FQ+   +G YEC+LTLPP+A
Sbjct: 562  TDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLSYGEGSYECQLTLPPTA 621

Query: 22   PIQKLIG 2
             +Q ++G
Sbjct: 622  ALQTIVG 628