BLASTX nr result

ID: Coptis21_contig00032684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032684
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309524.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_003550294.1| PREDICTED: uncharacterized protein LOC100789...   242   8e-62
emb|CAI46244.1| Myb-like protein [Humulus lupulus]                    234   2e-59
ref|XP_003543751.1| PREDICTED: transcription factor RAX1 [Glycin...   233   5e-59
ref|XP_002864521.1| hypothetical protein ARALYDRAFT_918940 [Arab...   232   8e-59

>ref|XP_002309524.1| predicted protein [Populus trichocarpa] gi|222855500|gb|EEE93047.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  251 bits (641), Expect = 2e-64
 Identities = 128/215 (59%), Positives = 152/215 (70%), Gaps = 12/215 (5%)
 Frame = +1

Query: 76  MGRAPCCDKANVKRGPWSPEEDFALKNYVGRHGTGGNWISLPQKAGLKRCGKSCRLRWLN 255
           MGRAPCCDKANVKRGPWSPEED  LK+Y+  HGTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDATLKSYLETHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 256 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILAG 435
           YLRPDIKHGGFTEEEDN+IC+LY  +GSRWS+IA+QL GRTDNDVKNYWNTKLKKKILAG
Sbjct: 61  YLRPDIKHGGFTEEEDNIICTLYSQMGSRWSLIAAQLPGRTDNDVKNYWNTKLKKKILAG 120

Query: 436 KITL-------NGEKMLTSNNHLQPXXXXXLAMHNASQNDNKCFSSY--LIQNSTTVPMS 588
           KI+L       N    + +   +       L +  A    +  FS +  L Q S T+P  
Sbjct: 121 KISLTIKNNPINAPVNVANIPAIPCSTSPILYVPKAETESSVTFSDHYSLTQISGTLPAL 180

Query: 589 MDVNVRQEVGSS--RLLPDSVKL-TFPGLVDSPEF 684
            D+     + S+   L P+  +  +FPG++D  EF
Sbjct: 181 SDIGYEPIINSTAQNLSPNQFQFSSFPGVIDMSEF 215


>ref|XP_003550294.1| PREDICTED: uncharacterized protein LOC100789985 [Glycine max]
          Length = 309

 Score =  242 bits (618), Expect = 8e-62
 Identities = 118/174 (67%), Positives = 133/174 (76%)
 Frame = +1

Query: 76  MGRAPCCDKANVKRGPWSPEEDFALKNYVGRHGTGGNWISLPQKAGLKRCGKSCRLRWLN 255
           MGRAPCCDKANVKRGPWSPEED  LKNYV  HGTGGNWI+LP+KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDATLKNYVETHGTGGNWIALPKKAGLRRCGKSCRLRWLN 60

Query: 256 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILAG 435
           YLRPDIKHGGFTEEEDN+IC+LY  +GSRWS IAS+L GRTDNDVKNYWNTKLKKKI+A 
Sbjct: 61  YLRPDIKHGGFTEEEDNIICTLYAQMGSRWSAIASKLPGRTDNDVKNYWNTKLKKKIMAR 120

Query: 436 KITLNGEKMLTSNNHLQPXXXXXLAMHNASQNDNKCFSSYLIQNSTTVPMSMDV 597
           K+TL   K LT N+ L P      ++ N         S +  QN  + P  + V
Sbjct: 121 KVTL---KTLTHNDTL-PSTSTPSSLTNNQNVKTSQNSPFPSQNQNSPPSVLPV 170


>emb|CAI46244.1| Myb-like protein [Humulus lupulus]
          Length = 264

 Score =  234 bits (598), Expect = 2e-59
 Identities = 115/178 (64%), Positives = 130/178 (73%)
 Frame = +1

Query: 76  MGRAPCCDKANVKRGPWSPEEDFALKNYVGRHGTGGNWISLPQKAGLKRCGKSCRLRWLN 255
           MGRAPCCDK  VKRGPWSPEED ALK+Y+  +GTGGNWI+LP KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDAALKHYMHNNGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 256 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILAG 435
           YLRPDIKHGGFTEEEDNV+ +LY NIGSRWSVIASQL GRTDNDVKN+WNTKLKKK+LA 
Sbjct: 61  YLRPDIKHGGFTEEEDNVVWTLYSNIGSRWSVIASQLPGRTDNDVKNHWNTKLKKKLLAR 120

Query: 436 KITLNGEKMLTSNNHLQPXXXXXLAMHNASQNDNKCFSSYLIQNSTTVPMSMDVNVRQ 609
               N     T + +L           N+ Q +    S+Y   NS T+P  M+ N  Q
Sbjct: 121 STNCNETTNTTDHLNLARFSPLIPKTENSDQGN----SAYCYTNSDTLPYLMNGNCVQ 174


>ref|XP_003543751.1| PREDICTED: transcription factor RAX1 [Glycine max]
          Length = 339

 Score =  233 bits (594), Expect = 5e-59
 Identities = 111/168 (66%), Positives = 130/168 (77%), Gaps = 8/168 (4%)
 Frame = +1

Query: 76  MGRAPCCDKANVKRGPWSPEEDFALKNYVGRHGTGGNWISLPQKAGLKRCGKSCRLRWLN 255
           MGRAPCCDKANVK+GPWSPEED ALK Y+ ++GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 256 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKI--- 426
           YLRP+IKHGGFTEEEDN+ICSLY +IGSRWS+IA+QL GRTDND+KNYWNT+LKKK+   
Sbjct: 61  YLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGR 120

Query: 427 -----LAGKITLNGEKMLTSNNHLQPXXXXXLAMHNASQNDNKCFSSY 555
                L+ K T NG +  + +N L       L +H   Q+    FS Y
Sbjct: 121 RKQSNLSAKDTNNGIEENSYSNALSSSALERLQLHMQLQSLQNPFSFY 168


>ref|XP_002864521.1| hypothetical protein ARALYDRAFT_918940 [Arabidopsis lyrata subsp.
           lyrata] gi|297310356|gb|EFH40780.1| hypothetical protein
           ARALYDRAFT_918940 [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score =  232 bits (592), Expect = 8e-59
 Identities = 116/195 (59%), Positives = 138/195 (70%), Gaps = 26/195 (13%)
 Frame = +1

Query: 76  MGRAPCCDKANVKRGPWSPEEDFALKNYVGRHGTGGNWISLPQKAGLKRCGKSCRLRWLN 255
           MGRAPCCDKANVK+GPWSPEED  LK+Y+ ++GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 256 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILA- 432
           YLRP+IKHGGF+EEED++I SLY +IGSRWS+IA+QL GRTDND+KNYWNTKLKKK+L  
Sbjct: 61  YLRPNIKHGGFSEEEDSIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 433 -------GKITLNGEKMLTSNNH------LQPXXXXXLAMHNASQNDNKCFSSY------ 555
                    IT + E  L +NNH      L       L +H   QN    FSS+      
Sbjct: 121 QKQMNRQDSITDSTENNLNNNNHNKSPQNLSNSALERLQLHMQLQNLQSPFSSFYNNPIL 180

Query: 556 ------LIQNSTTVP 582
                 L+Q++TT P
Sbjct: 181 WPKLHPLLQSTTTTP 195


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