BLASTX nr result

ID: Coptis21_contig00032682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032682
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   136   2e-30
emb|CAN83044.1| hypothetical protein VITISV_012267 [Vitis vinifera]   136   2e-30
ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   134   8e-30
ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...   134   8e-30
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...   133   2e-29

>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis
           vinifera] gi|296084015|emb|CBI24403.3| unnamed protein
           product [Vitis vinifera]
          Length = 1116

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/97 (64%), Positives = 76/97 (78%)
 Frame = +2

Query: 26  ECSGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYL 205
           E + T +N    D P+S F W I NFSRLN KKHYSE+F VGGYKWRVLI+PKGNNV++L
Sbjct: 37  ETTSTVENQPVEDPPTSRFTWRIENFSRLNTKKHYSENFIVGGYKWRVLIFPKGNNVEHL 96

Query: 206 SMYLDVAHAPDLPCGWSTNAQFSLSVANQVYSKYTVQ 316
           SMYLDVA +  LP GWS  AQFSL+V NQ+++KYTV+
Sbjct: 97  SMYLDVADSSSLPYGWSRYAQFSLAVVNQIHNKYTVR 133


>emb|CAN83044.1| hypothetical protein VITISV_012267 [Vitis vinifera]
          Length = 154

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/97 (64%), Positives = 76/97 (78%)
 Frame = +2

Query: 26  ECSGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYL 205
           E + T +N    D P+S F W I NFSRLN KKHYSE+F VGGYKWRVLI+PKGNNV++L
Sbjct: 37  ETTSTVENQPVEDPPTSRFTWRIENFSRLNTKKHYSENFIVGGYKWRVLIFPKGNNVEHL 96

Query: 206 SMYLDVAHAPDLPCGWSTNAQFSLSVANQVYSKYTVQ 316
           SMYLDVA +  LP GWS  AQFSL+V NQ+++KYTV+
Sbjct: 97  SMYLDVADSSSLPYGWSRYAQFSLAVVNQIHNKYTVR 133


>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/97 (62%), Positives = 75/97 (77%)
 Frame = +2

Query: 26  ECSGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYL 205
           E SGT +N    D P   F W I NFSRLN+KK+YS+SF VGGYKWR+L++PKGNNVD+L
Sbjct: 35  EPSGTVENQQVEDPPPIKFTWRIENFSRLNMKKYYSDSFSVGGYKWRILVFPKGNNVDHL 94

Query: 206 SMYLDVAHAPDLPCGWSTNAQFSLSVANQVYSKYTVQ 316
           SMYLDVA +  LP GWS  AQFSL+V NQV+ KY+++
Sbjct: 95  SMYLDVADSGTLPYGWSRYAQFSLAVVNQVHKKYSIR 131


>ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 12-like [Cucumis sativus]
          Length = 1110

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/97 (62%), Positives = 75/97 (77%)
 Frame = +2

Query: 26  ECSGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYL 205
           E SGT +N    D P   F W I NFSRLN+KK+YS+SF VGGYKWR+L++PKGNNVD+L
Sbjct: 35  EPSGTVENQQVEDPPPIKFTWRIENFSRLNMKKYYSDSFSVGGYKWRILVFPKGNNVDHL 94

Query: 206 SMYLDVAHAPDLPCGWSTNAQFSLSVANQVYSKYTVQ 316
           SMYLDVA +  LP GWS  AQFSL+V NQV+ KY+++
Sbjct: 95  SMYLDVADSGTLPYGWSRYAQFSLAVVNQVHKKYSIR 131


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1120

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/97 (61%), Positives = 75/97 (77%)
 Frame = +2

Query: 26  ECSGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYL 205
           E + T +N    D PS  F WTI NFSRLN KKHYS+ F VGGYKWR+LI+PKGNNVD+L
Sbjct: 36  EPASTVENQPVEDPPSMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHL 95

Query: 206 SMYLDVAHAPDLPCGWSTNAQFSLSVANQVYSKYTVQ 316
           SMYLDV+ +  LP GWS  AQFSL+V NQ+++KY+++
Sbjct: 96  SMYLDVSDSSTLPYGWSRYAQFSLAVVNQIHNKYSIR 132


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