BLASTX nr result
ID: Coptis21_contig00032664
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032664 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated... 141 6e-32 ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated... 140 1e-31 ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated... 137 7e-31 ref|XP_003609891.1| SWI/SNF-related matrix-associated actin-depe... 136 2e-30 ref|XP_002519341.1| Chromatin remodelling complex ATPase chain i... 135 3e-30 >ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Glycine max] Length = 751 Score = 141 bits (355), Expect = 6e-32 Identities = 69/76 (90%), Positives = 73/76 (96%) Frame = +1 Query: 1 KKKVGCIRIDGGTPASSRQALVTDFQEKEGIKAAVLSIKAGGIGLTLTAASTVIFAELSW 180 KKKVGCIRIDGGTPA+SRQ LVTDFQEK+ IKAAVLSIKAGG+GLTLTAASTVIFAELSW Sbjct: 570 KKKVGCIRIDGGTPAASRQQLVTDFQEKDAIKAAVLSIKAGGVGLTLTAASTVIFAELSW 629 Query: 181 TPGDIIQAEDRVHRIG 228 TPGD+IQAEDR HRIG Sbjct: 630 TPGDLIQAEDRAHRIG 645 >ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Vitis vinifera] gi|297736823|emb|CBI26024.3| unnamed protein product [Vitis vinifera] Length = 677 Score = 140 bits (352), Expect = 1e-31 Identities = 69/76 (90%), Positives = 73/76 (96%) Frame = +1 Query: 1 KKKVGCIRIDGGTPASSRQALVTDFQEKEGIKAAVLSIKAGGIGLTLTAASTVIFAELSW 180 KKKVGCIRIDG TP+SSRQA VTDFQEK+ IKAAVLSIKAGG+GLTLTAASTVIFAELSW Sbjct: 519 KKKVGCIRIDGSTPSSSRQAFVTDFQEKDTIKAAVLSIKAGGVGLTLTAASTVIFAELSW 578 Query: 181 TPGDIIQAEDRVHRIG 228 TPGD+IQAEDRVHRIG Sbjct: 579 TPGDLIQAEDRVHRIG 594 >ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Glycine max] Length = 665 Score = 137 bits (346), Expect = 7e-31 Identities = 67/76 (88%), Positives = 72/76 (94%) Frame = +1 Query: 1 KKKVGCIRIDGGTPASSRQALVTDFQEKEGIKAAVLSIKAGGIGLTLTAASTVIFAELSW 180 KKKVGCIRIDG TPA+SRQ LVTDFQEK+ IKAAVLSIKAGG+GLTLTAASTVIF+ELSW Sbjct: 507 KKKVGCIRIDGSTPAASRQQLVTDFQEKDSIKAAVLSIKAGGVGLTLTAASTVIFSELSW 566 Query: 181 TPGDIIQAEDRVHRIG 228 TPGD+IQAEDR HRIG Sbjct: 567 TPGDLIQAEDRAHRIG 582 >ref|XP_003609891.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein [Medicago truncatula] gi|355510946|gb|AES92088.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein [Medicago truncatula] Length = 764 Score = 136 bits (343), Expect = 2e-30 Identities = 67/76 (88%), Positives = 72/76 (94%) Frame = +1 Query: 1 KKKVGCIRIDGGTPASSRQALVTDFQEKEGIKAAVLSIKAGGIGLTLTAASTVIFAELSW 180 KKKV CIRIDGGTP+ SRQ LVT+FQEK+ IKAAVLSIKAGG+GLTLTAASTVIFAELSW Sbjct: 581 KKKVACIRIDGGTPSGSRQQLVTEFQEKDTIKAAVLSIKAGGVGLTLTAASTVIFAELSW 640 Query: 181 TPGDIIQAEDRVHRIG 228 TPGD+IQAEDRVHRIG Sbjct: 641 TPGDLIQAEDRVHRIG 656 >ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] gi|223541656|gb|EEF43205.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] Length = 674 Score = 135 bits (341), Expect = 3e-30 Identities = 67/76 (88%), Positives = 71/76 (93%) Frame = +1 Query: 1 KKKVGCIRIDGGTPASSRQALVTDFQEKEGIKAAVLSIKAGGIGLTLTAASTVIFAELSW 180 KKKVGCIRIDG TP SRQ+LVTDFQEK+ IKAAVLSIKAGG+GLTLTAASTVIFAELSW Sbjct: 516 KKKVGCIRIDGRTPPVSRQSLVTDFQEKDAIKAAVLSIKAGGVGLTLTAASTVIFAELSW 575 Query: 181 TPGDIIQAEDRVHRIG 228 TPGD+IQAEDR HRIG Sbjct: 576 TPGDLIQAEDRAHRIG 591