BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032662
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,...    92   6e-17
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...    89   5e-16

>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -3

Query: 358  RKVFTSMRERKLLTEANLIIYEEQLIDHMKKKTAGLVLSGLKFFGLESKLKSKGSTILP 182
            RKVF++MRERKLLTEAN+I+Y+E LI+HMKKKTA LVLSGLKFFGLESKL+SKGST+LP
Sbjct: 1166 RKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLP 1224


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -3

Query: 358 RKVFTSMRERKLLTEANLIIYEEQLIDHMKKKTAGLVLSGLKFFGLESKLKSKGSTILP 182
           RKVF++MRERKLLTEAN+I+Y+E LI+HMKKKTA LVLSGLKFFGLESKL+SKGST+LP
Sbjct: 662 RKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLP 720


>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1128

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/58 (75%), Positives = 53/58 (91%)
 Frame = -3

Query: 358  RKVFTSMRERKLLTEANLIIYEEQLIDHMKKKTAGLVLSGLKFFGLESKLKSKGSTIL 185
            RKVFT++RERKLLTEA  I Y+E+LI+HMKKKTA LV+SGLKFFGLESKL++KG T+L
Sbjct: 1069 RKVFTNLRERKLLTEAKTIFYDERLIEHMKKKTADLVVSGLKFFGLESKLRAKGCTLL 1126


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 358 RKVFTSMRERKLLTEANLIIYEEQLIDHMKKKTAGLVLSGLKFFGLESKLKSKGSTILP 182
           RKVF+++RER  LTE+N I+Y+E LIDHMKKKTA LVLS LKFFGLESKLK+KG  +LP
Sbjct: 674 RKVFSNLRERNFLTESNTIVYDELLIDHMKKKTADLVLSSLKFFGLESKLKAKGCKLLP 732


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = -3

Query: 358 RKVFTSMRERKLLTEANLIIYEEQLIDHMKKKTAGLVLSGLKFFGLESKLKSKG 197
           RKVF+ +RERKLLTE++ I+Y+E LIDHMKKKTA LV+SGLKFFGLESKLKSKG
Sbjct: 664 RKVFSILRERKLLTESDTIVYDELLIDHMKKKTADLVISGLKFFGLESKLKSKG 717