BLASTX nr result

ID: Coptis21_contig00032654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032654
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    57   6e-06

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 46/130 (35%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
 Frame = -1

Query: 606 TSCLFKLEKCESHCSRGKHIW*LFDRIIQLPT*Y*ISSIYRRCLP*DRFGTNGSWTLEAI 427
           TS LF+ E+   H     HI      +I L         Y   +P         WTL+  
Sbjct: 330 TSLLFESEESNLHSDGFWHIIYNSPHLIAL-------QFYGVSMPKVPSNCREDWTLDPS 382

Query: 426 PQPFLPHLKSVELSSFDGNEKELGLVGFLLKNARALLKV-TIRSSSTLSSNPKKKIGVLK 250
           P  FL  LK +++  F G+EKEL  VGFLLKNA AL  +  I S S        K   + 
Sbjct: 383 PPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQGVDKTNEIH 442

Query: 249 QLLMMLPRVS 220
           Q L+ LPR S
Sbjct: 443 QQLLALPRWS 452


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