BLASTX nr result

ID: Coptis21_contig00032638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032638
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320483.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002525334.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
ref|XP_002302862.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|NP_001189662.1| uncharacterized protein [Arabidopsis thalian...    87   2e-15
ref|XP_002881255.1| hypothetical protein ARALYDRAFT_482239 [Arab...    87   2e-15

>ref|XP_002320483.1| predicted protein [Populus trichocarpa] gi|222861256|gb|EEE98798.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/88 (53%), Positives = 53/88 (60%)
 Frame = +3

Query: 3   YTPIRVVLQLAKLXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXTVSSYDVSIWRSLWND 182
           Y PIR+VL LA                 W               TVS+Y+VS+WRSLWND
Sbjct: 477 YAPIRLVLALAGFVAFTCGWISEMIGDLWQSVSGIFQLASVSKATVSTYEVSVWRSLWND 536

Query: 183 LFSQVFRAIRSIVNGFVAFFVACNRHRL 266
           LFSQVFRA+RSI+NGFVAFF ACNRHRL
Sbjct: 537 LFSQVFRAVRSILNGFVAFFTACNRHRL 564


>ref|XP_002525334.1| conserved hypothetical protein [Ricinus communis]
           gi|223535393|gb|EEF37067.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 617

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/88 (51%), Positives = 54/88 (61%)
 Frame = +3

Query: 3   YTPIRVVLQLAKLXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXTVSSYDVSIWRSLWND 182
           Y PIR+VL +A L               W               T+S+Y+VS+WRSLWND
Sbjct: 482 YAPIRMVLAMASLVAFICASISELIGDIWRSLSTIFQFASASEATISTYEVSMWRSLWND 541

Query: 183 LFSQVFRAIRSIVNGFVAFFVACNRHRL 266
           +FSQVFRA+RSI+NGFVAFF ACNRHRL
Sbjct: 542 IFSQVFRALRSILNGFVAFFTACNRHRL 569


>ref|XP_002302862.1| predicted protein [Populus trichocarpa] gi|222844588|gb|EEE82135.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/88 (52%), Positives = 52/88 (59%)
 Frame = +3

Query: 3   YTPIRVVLQLAKLXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXTVSSYDVSIWRSLWND 182
           Y PIR+VL LA L               W                VS+ +VS+WRSLWND
Sbjct: 455 YAPIRLVLALAGLVAFTCAWISEMIGDIWKYLNGIFQLAAASDARVSTCEVSMWRSLWND 514

Query: 183 LFSQVFRAIRSIVNGFVAFFVACNRHRL 266
           LFSQVFRA+RSI+NGFVAFF ACNRHRL
Sbjct: 515 LFSQVFRAVRSILNGFVAFFAACNRHRL 542


>ref|NP_001189662.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330253675|gb|AEC08769.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 690

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/88 (48%), Positives = 49/88 (55%)
 Frame = +3

Query: 3   YTPIRVVLQLAKLXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXTVSSYDVSIWRSLWND 182
           Y PIRVV  LA                 W                V +Y+VS+WR+LWND
Sbjct: 555 YAPIRVVAALANCLAVSFSYIFDVIGDLWRYMSSILQLASDSQAAVKTYEVSMWRTLWND 614

Query: 183 LFSQVFRAIRSIVNGFVAFFVACNRHRL 266
           LFS VFRA+RSI+NGFVAFF ACNRHRL
Sbjct: 615 LFSHVFRAVRSILNGFVAFFAACNRHRL 642


>ref|XP_002881255.1| hypothetical protein ARALYDRAFT_482239 [Arabidopsis lyrata subsp.
           lyrata] gi|297327094|gb|EFH57514.1| hypothetical protein
           ARALYDRAFT_482239 [Arabidopsis lyrata subsp. lyrata]
          Length = 574

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/88 (48%), Positives = 49/88 (55%)
 Frame = +3

Query: 3   YTPIRVVLQLAKLXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXTVSSYDVSIWRSLWND 182
           Y PIRVV  LA                 W                V +Y+VS+WR+LWND
Sbjct: 442 YAPIRVVAALANCLAVSFSYIFDVIGDLWRYMSSILQLASDSQAAVKTYEVSMWRTLWND 501

Query: 183 LFSQVFRAIRSIVNGFVAFFVACNRHRL 266
           LFS VFRA+RSI+NGFVAFF ACNRHRL
Sbjct: 502 LFSHVFRAVRSILNGFVAFFAACNRHRL 529


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