BLASTX nr result
ID: Coptis21_contig00032636
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032636 (637 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35869.3| unnamed protein product [Vitis vinifera] 316 3e-84 ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 pr... 316 3e-84 ref|XP_002299589.1| GRAS family transcription factor [Populus tr... 300 1e-79 gb|ADL36817.1| SCL domain class transcription factor [Malus x do... 297 1e-78 ref|XP_002521327.1| Nodulation signaling pathway 1 protein, puta... 296 2e-78 >emb|CBI35869.3| unnamed protein product [Vitis vinifera] Length = 504 Score = 316 bits (809), Expect = 3e-84 Identities = 144/184 (78%), Positives = 163/184 (88%) Frame = -1 Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455 N+PLQ+L+PQ +++SPDETLI CAQFRLH LNH TPD+R FLKV+R LEP+AV+L EN+ Sbjct: 311 NHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKLEPEAVILSENN 370 Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275 M CSC CGDF TGFSRR+EYLW+FLDSTS AFKGRE EERRVMEGEAA AL + EMNE Sbjct: 371 MDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAARALTNPGEMNE 430 Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95 GKEKWCE+MRGVGFAGEVFGEDAIDGARALL+KYDSNWEMR++E+DGCV LWWK PVSF Sbjct: 431 GKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCVGLWWKGLPVSF 490 Query: 94 CSLW 83 CSLW Sbjct: 491 CSLW 494 >ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 protein [Vitis vinifera] Length = 545 Score = 316 bits (809), Expect = 3e-84 Identities = 144/184 (78%), Positives = 163/184 (88%) Frame = -1 Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455 N+PLQ+L+PQ +++SPDETLI CAQFRLH LNH TPD+R FLKV+R LEP+AV+L EN+ Sbjct: 352 NHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKLEPEAVILSENN 411 Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275 M CSC CGDF TGFSRR+EYLW+FLDSTS AFKGRE EERRVMEGEAA AL + EMNE Sbjct: 412 MDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAARALTNPGEMNE 471 Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95 GKEKWCE+MRGVGFAGEVFGEDAIDGARALL+KYDSNWEMR++E+DGCV LWWK PVSF Sbjct: 472 GKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCVGLWWKGLPVSF 531 Query: 94 CSLW 83 CSLW Sbjct: 532 CSLW 535 >ref|XP_002299589.1| GRAS family transcription factor [Populus trichocarpa] gi|66947640|emb|CAJ00014.1| Nodulation Signaling Pathway 1 protein homologue 1 [Populus trichocarpa] gi|222846847|gb|EEE84394.1| GRAS family transcription factor [Populus trichocarpa] Length = 556 Score = 300 bits (768), Expect = 1e-79 Identities = 140/193 (72%), Positives = 159/193 (82%) Frame = -1 Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455 N+ LQ L+ + +++ PDE LI CAQFRLH LNH TPD+R FL+V+R LEPK V+L EN+ Sbjct: 362 NHSLQKLSGRIIDTKPDEALIVCAQFRLHHLNHNTPDERTEFLRVLRRLEPKGVILTENN 421 Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275 M CSCN CGDF TGFSRRVEYLWRFLDSTS+AFKGRE ERR+MEGEAA AL + EMNE Sbjct: 422 MDCSCNSCGDFATGFSRRVEYLWRFLDSTSSAFKGRESVERRMMEGEAAKALTNRGEMNE 481 Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95 GKEKWCE+MRGVGF GE+FGEDAIDGARALLRKYDSNWEMR + +DGCV LWWK QPVSF Sbjct: 482 GKEKWCERMRGVGFVGELFGEDAIDGARALLRKYDSNWEMRGEGKDGCVGLWWKGQPVSF 541 Query: 94 CSLWTSKKGGKDS 56 CSLW G +S Sbjct: 542 CSLWKLDMKGSES 554 >gb|ADL36817.1| SCL domain class transcription factor [Malus x domestica] Length = 552 Score = 297 bits (760), Expect = 1e-78 Identities = 138/182 (75%), Positives = 153/182 (84%) Frame = -1 Query: 628 PLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCENDMS 449 PL+ LN Q +++S DETLI C QFRLH LNH PD+R FLK +RS+EPK V+L EN+M Sbjct: 362 PLKTLNAQLIDASNDETLIVCVQFRLHQLNHNAPDERTEFLKSLRSMEPKGVILSENNME 421 Query: 448 CSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNEGK 269 CSCN CGDF TGFSR+VEYLWRFLDSTS AFKGRE EERRVMEGEAA AL + EMNEGK Sbjct: 422 CSCNNCGDFATGFSRQVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKALTNRGEMNEGK 481 Query: 268 EKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSFCS 89 EKW E+MR VGF GEVFGEDAIDG RALLRKYDSNWEM++DE+DGCV LWWK QPVSFCS Sbjct: 482 EKWGERMRRVGFVGEVFGEDAIDGGRALLRKYDSNWEMKVDEKDGCVGLWWKGQPVSFCS 541 Query: 88 LW 83 LW Sbjct: 542 LW 543 >ref|XP_002521327.1| Nodulation signaling pathway 1 protein, putative [Ricinus communis] gi|223539405|gb|EEF40995.1| Nodulation signaling pathway 1 protein, putative [Ricinus communis] Length = 548 Score = 296 bits (759), Expect = 2e-78 Identities = 139/193 (72%), Positives = 159/193 (82%) Frame = -1 Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455 N+PLQ+LN Q +N++P++TL+ CAQFRLH LNH PD+R FLKV+RSLEPK V+L EN+ Sbjct: 357 NHPLQSLNAQVINTNPEDTLVVCAQFRLHHLNHNNPDERTEFLKVLRSLEPKGVILSENN 416 Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275 C CGDF TGFSRRV+YLW+FLDSTS+AFKGRE EERRVMEGEAA ALI+ EMN+ Sbjct: 417 TD-RCQICGDFATGFSRRVDYLWKFLDSTSSAFKGRESEERRVMEGEAAKALINCGEMND 475 Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95 GKEKWCE+MR GF GEVFGED IDGARALLRKYDSNWEMR +E+DGCV LWWK QPVSF Sbjct: 476 GKEKWCERMRDSGFVGEVFGEDTIDGARALLRKYDSNWEMRTEEKDGCVGLWWKGQPVSF 535 Query: 94 CSLWTSKKGGKDS 56 CSLW G DS Sbjct: 536 CSLWRLDMKGNDS 548