BLASTX nr result

ID: Coptis21_contig00032636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032636
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35869.3| unnamed protein product [Vitis vinifera]              316   3e-84
ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 pr...   316   3e-84
ref|XP_002299589.1| GRAS family transcription factor [Populus tr...   300   1e-79
gb|ADL36817.1| SCL domain class transcription factor [Malus x do...   297   1e-78
ref|XP_002521327.1| Nodulation signaling pathway 1 protein, puta...   296   2e-78

>emb|CBI35869.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  316 bits (809), Expect = 3e-84
 Identities = 144/184 (78%), Positives = 163/184 (88%)
 Frame = -1

Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455
           N+PLQ+L+PQ +++SPDETLI CAQFRLH LNH TPD+R  FLKV+R LEP+AV+L EN+
Sbjct: 311 NHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKLEPEAVILSENN 370

Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275
           M CSC  CGDF TGFSRR+EYLW+FLDSTS AFKGRE EERRVMEGEAA AL +  EMNE
Sbjct: 371 MDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAARALTNPGEMNE 430

Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95
           GKEKWCE+MRGVGFAGEVFGEDAIDGARALL+KYDSNWEMR++E+DGCV LWWK  PVSF
Sbjct: 431 GKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCVGLWWKGLPVSF 490

Query: 94  CSLW 83
           CSLW
Sbjct: 491 CSLW 494


>ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 protein [Vitis vinifera]
          Length = 545

 Score =  316 bits (809), Expect = 3e-84
 Identities = 144/184 (78%), Positives = 163/184 (88%)
 Frame = -1

Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455
           N+PLQ+L+PQ +++SPDETLI CAQFRLH LNH TPD+R  FLKV+R LEP+AV+L EN+
Sbjct: 352 NHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKLEPEAVILSENN 411

Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275
           M CSC  CGDF TGFSRR+EYLW+FLDSTS AFKGRE EERRVMEGEAA AL +  EMNE
Sbjct: 412 MDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAARALTNPGEMNE 471

Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95
           GKEKWCE+MRGVGFAGEVFGEDAIDGARALL+KYDSNWEMR++E+DGCV LWWK  PVSF
Sbjct: 472 GKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCVGLWWKGLPVSF 531

Query: 94  CSLW 83
           CSLW
Sbjct: 532 CSLW 535


>ref|XP_002299589.1| GRAS family transcription factor [Populus trichocarpa]
           gi|66947640|emb|CAJ00014.1| Nodulation Signaling Pathway
           1 protein homologue 1 [Populus trichocarpa]
           gi|222846847|gb|EEE84394.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 556

 Score =  300 bits (768), Expect = 1e-79
 Identities = 140/193 (72%), Positives = 159/193 (82%)
 Frame = -1

Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455
           N+ LQ L+ + +++ PDE LI CAQFRLH LNH TPD+R  FL+V+R LEPK V+L EN+
Sbjct: 362 NHSLQKLSGRIIDTKPDEALIVCAQFRLHHLNHNTPDERTEFLRVLRRLEPKGVILTENN 421

Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275
           M CSCN CGDF TGFSRRVEYLWRFLDSTS+AFKGRE  ERR+MEGEAA AL +  EMNE
Sbjct: 422 MDCSCNSCGDFATGFSRRVEYLWRFLDSTSSAFKGRESVERRMMEGEAAKALTNRGEMNE 481

Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95
           GKEKWCE+MRGVGF GE+FGEDAIDGARALLRKYDSNWEMR + +DGCV LWWK QPVSF
Sbjct: 482 GKEKWCERMRGVGFVGELFGEDAIDGARALLRKYDSNWEMRGEGKDGCVGLWWKGQPVSF 541

Query: 94  CSLWTSKKGGKDS 56
           CSLW     G +S
Sbjct: 542 CSLWKLDMKGSES 554


>gb|ADL36817.1| SCL domain class transcription factor [Malus x domestica]
          Length = 552

 Score =  297 bits (760), Expect = 1e-78
 Identities = 138/182 (75%), Positives = 153/182 (84%)
 Frame = -1

Query: 628 PLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCENDMS 449
           PL+ LN Q +++S DETLI C QFRLH LNH  PD+R  FLK +RS+EPK V+L EN+M 
Sbjct: 362 PLKTLNAQLIDASNDETLIVCVQFRLHQLNHNAPDERTEFLKSLRSMEPKGVILSENNME 421

Query: 448 CSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNEGK 269
           CSCN CGDF TGFSR+VEYLWRFLDSTS AFKGRE EERRVMEGEAA AL +  EMNEGK
Sbjct: 422 CSCNNCGDFATGFSRQVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKALTNRGEMNEGK 481

Query: 268 EKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSFCS 89
           EKW E+MR VGF GEVFGEDAIDG RALLRKYDSNWEM++DE+DGCV LWWK QPVSFCS
Sbjct: 482 EKWGERMRRVGFVGEVFGEDAIDGGRALLRKYDSNWEMKVDEKDGCVGLWWKGQPVSFCS 541

Query: 88  LW 83
           LW
Sbjct: 542 LW 543


>ref|XP_002521327.1| Nodulation signaling pathway 1 protein, putative [Ricinus communis]
           gi|223539405|gb|EEF40995.1| Nodulation signaling pathway
           1 protein, putative [Ricinus communis]
          Length = 548

 Score =  296 bits (759), Expect = 2e-78
 Identities = 139/193 (72%), Positives = 159/193 (82%)
 Frame = -1

Query: 634 NYPLQALNPQNLNSSPDETLIACAQFRLHCLNHTTPDDRMAFLKVMRSLEPKAVVLCEND 455
           N+PLQ+LN Q +N++P++TL+ CAQFRLH LNH  PD+R  FLKV+RSLEPK V+L EN+
Sbjct: 357 NHPLQSLNAQVINTNPEDTLVVCAQFRLHHLNHNNPDERTEFLKVLRSLEPKGVILSENN 416

Query: 454 MSCSCNQCGDFTTGFSRRVEYLWRFLDSTSTAFKGRECEERRVMEGEAATALISTLEMNE 275
               C  CGDF TGFSRRV+YLW+FLDSTS+AFKGRE EERRVMEGEAA ALI+  EMN+
Sbjct: 417 TD-RCQICGDFATGFSRRVDYLWKFLDSTSSAFKGRESEERRVMEGEAAKALINCGEMND 475

Query: 274 GKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVCLWWKSQPVSF 95
           GKEKWCE+MR  GF GEVFGED IDGARALLRKYDSNWEMR +E+DGCV LWWK QPVSF
Sbjct: 476 GKEKWCERMRDSGFVGEVFGEDTIDGARALLRKYDSNWEMRTEEKDGCVGLWWKGQPVSF 535

Query: 94  CSLWTSKKGGKDS 56
           CSLW     G DS
Sbjct: 536 CSLWRLDMKGNDS 548


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