BLASTX nr result

ID: Coptis21_contig00032635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032635
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532747.1| conserved hypothetical protein [Ricinus comm...   434   e-119
ref|XP_002321673.1| predicted protein [Populus trichocarpa] gi|2...   427   e-118
ref|XP_002283893.1| PREDICTED: cell division control protein 45 ...   422   e-116
emb|CAN78533.1| hypothetical protein VITISV_006310 [Vitis vinifera]   422   e-116
emb|CBI31762.3| unnamed protein product [Vitis vinifera]              416   e-114

>ref|XP_002532747.1| conserved hypothetical protein [Ricinus communis]
           gi|223527524|gb|EEF29649.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 595

 Score =  434 bits (1115), Expect = e-119
 Identities = 210/235 (89%), Positives = 225/235 (95%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3   EDDPIKLFKKLKKEYYHLGTFHGKPSGCLMFDLSHCLRKNTNELLWLACVSLTDQFVHER 182
           EDDP++LF+KLK+EYYH+GTFHGKPSGCLM+DLSH LRKNT ELLWLACVSLTDQFVHER
Sbjct: 198 EDDPVRLFRKLKREYYHMGTFHGKPSGCLMYDLSHSLRKNTTELLWLACVSLTDQFVHER 257

Query: 183 LTNERYLAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPDASRIAYEDEPRLMLLREWN 362
           LT+ERY AGVMELEQHINSSGNL+AV+ VTLKDGTKIRAP++SRIAYEDEPRLMLLREWN
Sbjct: 258 LTDERYQAGVMELEQHINSSGNLEAVSMVTLKDGTKIRAPESSRIAYEDEPRLMLLREWN 317

Query: 363 LFDSMLCSSYIATKLKTWSDNGLKKLKLLLCRMGFPLADCQQKFQYMNQEVKRQMKDEFE 542
           LFDSMLCSSYIATKLKTWSDNG+KKLKLLL RMGF L DCQQKFQYMN EVKR+MKDEFE
Sbjct: 318 LFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFE 377

Query: 543 RFLPEYGLTEFYYRSFLRLHGYSSKVSAADVVYGVTALLES-VQSEGSCASKQFG 704
           RFLPEYGLT+FYYRSFLRLHGYSSKVSAADVVYGVTALLES V S+GSCASKQFG
Sbjct: 378 RFLPEYGLTDFYYRSFLRLHGYSSKVSAADVVYGVTALLESFVSSDGSCASKQFG 432


>ref|XP_002321673.1| predicted protein [Populus trichocarpa] gi|222868669|gb|EEF05800.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  427 bits (1099), Expect = e-118
 Identities = 208/235 (88%), Positives = 224/235 (95%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3   EDDPIKLFKKLKKEYYHLGTFHGKPSGCLMFDLSHCLRKNTNELLWLACVSLTDQFVHER 182
           E DP++LF+KLK+EYY  GTFHGKPSGCLM+DLSH LRKNTNELLWLACVSLTDQFVHER
Sbjct: 195 EADPVQLFRKLKREYYRRGTFHGKPSGCLMYDLSHLLRKNTNELLWLACVSLTDQFVHER 254

Query: 183 LTNERYLAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPDASRIAYEDEPRLMLLREWN 362
           LT+ERYLAGVMELEQHINSSGNL+AVT VTLKDGTKIRAP++SRIAYEDEPRLMLLREWN
Sbjct: 255 LTDERYLAGVMELEQHINSSGNLEAVTVVTLKDGTKIRAPESSRIAYEDEPRLMLLREWN 314

Query: 363 LFDSMLCSSYIATKLKTWSDNGLKKLKLLLCRMGFPLADCQQKFQYMNQEVKRQMKDEFE 542
           LFDSMLCSSYIATKLKTW+DNG+KKLKLLL RMGF L DCQQKFQYMN EVKR+MKDEFE
Sbjct: 315 LFDSMLCSSYIATKLKTWNDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFE 374

Query: 543 RFLPEYGLTEFYYRSFLRLHGYSSKVSAADVVYGVTALLES-VQSEGSCASKQFG 704
           RFLPEYGL++FYYRSFLRLHGYSS+VSAADVVYGVTALLES V S+GSCASKQFG
Sbjct: 375 RFLPEYGLSDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVSSDGSCASKQFG 429


>ref|XP_002283893.1| PREDICTED: cell division control protein 45 homolog [Vitis
           vinifera]
          Length = 592

 Score =  422 bits (1085), Expect = e-116
 Identities = 205/235 (87%), Positives = 223/235 (94%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3   EDDPIKLFKKLKKEYYHLGTFHGKPSGCLMFDLSHCLRKNTNELLWLACVSLTDQFVHER 182
           E DP++L +KL +EYY++GTFHGKPSGCLMF+L+H LRKNTNELLWLACVSLTDQFVHER
Sbjct: 195 EADPVQLLRKLTREYYNMGTFHGKPSGCLMFELAHSLRKNTNELLWLACVSLTDQFVHER 254

Query: 183 LTNERYLAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPDASRIAYEDEPRLMLLREWN 362
           LT+ERY AGVMELEQHINSSGNLD +TSVTLKDGTKIRAPD+SRIAYEDEPRLMLL+EWN
Sbjct: 255 LTDERYQAGVMELEQHINSSGNLDTITSVTLKDGTKIRAPDSSRIAYEDEPRLMLLQEWN 314

Query: 363 LFDSMLCSSYIATKLKTWSDNGLKKLKLLLCRMGFPLADCQQKFQYMNQEVKRQMKDEFE 542
           LFDSMLCSSYIATKLKTWSDNG+KKLKLLL RMGF L DCQQKFQYMN EVKR+MKDEFE
Sbjct: 315 LFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFE 374

Query: 543 RFLPEYGLTEFYYRSFLRLHGYSSKVSAADVVYGVTALLES-VQSEGSCASKQFG 704
           RFLPEYGLT+FYYRSFLRLHGYSS+VSAADVVYGVTALLES V+S+GS ASKQFG
Sbjct: 375 RFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVKSDGSSASKQFG 429


>emb|CAN78533.1| hypothetical protein VITISV_006310 [Vitis vinifera]
          Length = 592

 Score =  422 bits (1085), Expect = e-116
 Identities = 205/235 (87%), Positives = 223/235 (94%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3   EDDPIKLFKKLKKEYYHLGTFHGKPSGCLMFDLSHCLRKNTNELLWLACVSLTDQFVHER 182
           E DP++L +KL +EYY++GTFHGKPSGCLMF+L+H LRKNTNELLWLACVSLTDQFVHER
Sbjct: 195 EADPVQLLRKLTREYYNMGTFHGKPSGCLMFELAHSLRKNTNELLWLACVSLTDQFVHER 254

Query: 183 LTNERYLAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPDASRIAYEDEPRLMLLREWN 362
           LT+ERY AGVMELEQHINSSGNLD +TSVTLKDGTKIRAPD+SRIAYEDEPRLMLL+EWN
Sbjct: 255 LTDERYQAGVMELEQHINSSGNLDTITSVTLKDGTKIRAPDSSRIAYEDEPRLMLLQEWN 314

Query: 363 LFDSMLCSSYIATKLKTWSDNGLKKLKLLLCRMGFPLADCQQKFQYMNQEVKRQMKDEFE 542
           LFDSMLCSSYIATKLKTWSDNG+KKLKLLL RMGF L DCQQKFQYMN EVKR+MKDEFE
Sbjct: 315 LFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFE 374

Query: 543 RFLPEYGLTEFYYRSFLRLHGYSSKVSAADVVYGVTALLES-VQSEGSCASKQFG 704
           RFLPEYGLT+FYYRSFLRLHGYSS+VSAADVVYGVTALLES V+S+GS ASKQFG
Sbjct: 375 RFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVKSDGSSASKQFG 429


>emb|CBI31762.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  416 bits (1068), Expect = e-114
 Identities = 202/231 (87%), Positives = 220/231 (95%), Gaps = 1/231 (0%)
 Frame = +3

Query: 15  IKLFKKLKKEYYHLGTFHGKPSGCLMFDLSHCLRKNTNELLWLACVSLTDQFVHERLTNE 194
           ++L +KL +EYY++GTFHGKPSGCLMF+L+H LRKNTNELLWLACVSLTDQFVHERLT+E
Sbjct: 105 LQLLRKLTREYYNMGTFHGKPSGCLMFELAHSLRKNTNELLWLACVSLTDQFVHERLTDE 164

Query: 195 RYLAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPDASRIAYEDEPRLMLLREWNLFDS 374
           RY AGVMELEQHINSSGNLD +TSVTLKDGTKIRAPD+SRIAYEDEPRLMLL+EWNLFDS
Sbjct: 165 RYQAGVMELEQHINSSGNLDTITSVTLKDGTKIRAPDSSRIAYEDEPRLMLLQEWNLFDS 224

Query: 375 MLCSSYIATKLKTWSDNGLKKLKLLLCRMGFPLADCQQKFQYMNQEVKRQMKDEFERFLP 554
           MLCSSYIATKLKTWSDNG+KKLKLLL RMGF L DCQQKFQYMN EVKR+MKDEFERFLP
Sbjct: 225 MLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLP 284

Query: 555 EYGLTEFYYRSFLRLHGYSSKVSAADVVYGVTALLES-VQSEGSCASKQFG 704
           EYGLT+FYYRSFLRLHGYSS+VSAADVVYGVTALLES V+S+GS ASKQFG
Sbjct: 285 EYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVKSDGSSASKQFG 335


Top