BLASTX nr result

ID: Coptis21_contig00032628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032628
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27584.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002512936.1| ATP binding protein, putative [Ricinus commu...   160   1e-37
ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
emb|CAN83106.1| hypothetical protein VITISV_041822 [Vitis vinifera]   158   4e-37
ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-l...   158   5e-37

>emb|CBI27584.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/93 (78%), Positives = 85/93 (91%)
 Frame = -1

Query: 280 QLTLSGMLNFVDGLWSSCGDERIIVFTTNNKDRLDPALLRPGRMDVHIHMSYCDPCGFRV 101
           QLTLSG LNF+DGLWSSCG+ERIIVFTTN+KD+LDPALLRPGRMDVHIHMS+C+PCGF+ 
Sbjct: 296 QLTLSGFLNFIDGLWSSCGNERIIVFTTNHKDKLDPALLRPGRMDVHIHMSFCNPCGFKT 355

Query: 100 LANNYLEVSNHPVFDEIERLLEITNVTPAEVAE 2
           LA+NYL+VSNH +F EIE+LL    VTPAE+AE
Sbjct: 356 LASNYLDVSNHKLFPEIEKLLMEVEVTPAEIAE 388


>ref|XP_002512936.1| ATP binding protein, putative [Ricinus communis]
           gi|223547947|gb|EEF49439.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 501

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/93 (76%), Positives = 85/93 (91%)
 Frame = -1

Query: 280 QLTLSGMLNFVDGLWSSCGDERIIVFTTNNKDRLDPALLRPGRMDVHIHMSYCDPCGFRV 101
           Q+TLSG+LNFVDGLWSSCGDER+IVFTTN+K++LDPALLRPGRMDVHIHMSYC PCGF++
Sbjct: 343 QVTLSGLLNFVDGLWSSCGDERVIVFTTNHKEKLDPALLRPGRMDVHIHMSYCTPCGFKM 402

Query: 100 LANNYLEVSNHPVFDEIERLLEITNVTPAEVAE 2
           LA NYL ++ HP+F EIE ++EIT VTPAE+ E
Sbjct: 403 LAFNYLGITEHPLFLEIEEMIEITKVTPAEIGE 435


>ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|222852452|gb|EEE89999.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  159 bits (402), Expect = 2e-37
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = -1

Query: 280 QLTLSGMLNFVDGLWSSCGDERIIVFTTNNKDRLDPALLRPGRMDVHIHMSYCDPCGFRV 101
           QLTLSG+LNFVDGLWSSCGDERIIVFTTN KD+LDPALLRPGRMD+HIHMSYC PCGF++
Sbjct: 318 QLTLSGLLNFVDGLWSSCGDERIIVFTTNYKDKLDPALLRPGRMDMHIHMSYCTPCGFKI 377

Query: 100 LANNYLEVSNHPVFDEIERLLEITNVTPAEVAE 2
           LA+NYL V NH +F +IE L+    VTPAEVAE
Sbjct: 378 LASNYLNVKNHSLFSQIEELIMEVEVTPAEVAE 410


>emb|CAN83106.1| hypothetical protein VITISV_041822 [Vitis vinifera]
          Length = 469

 Score =  158 bits (400), Expect = 4e-37
 Identities = 72/93 (77%), Positives = 83/93 (89%)
 Frame = -1

Query: 280 QLTLSGMLNFVDGLWSSCGDERIIVFTTNNKDRLDPALLRPGRMDVHIHMSYCDPCGFRV 101
           QLTLSG LNF+DGLWSSCG+ERIIVFTTN+KD+LDPALLRPG MDVHIHMSYC+PCGF+ 
Sbjct: 318 QLTLSGFLNFIDGLWSSCGNERIIVFTTNHKDKLDPALLRPGHMDVHIHMSYCNPCGFKT 377

Query: 100 LANNYLEVSNHPVFDEIERLLEITNVTPAEVAE 2
           LA NYL++SNH +F EIE+LL    VTPAE+AE
Sbjct: 378 LAFNYLDISNHKLFPEIEKLLMEVEVTPAEIAE 410


>ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-like [Vitis vinifera]
          Length = 543

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/93 (78%), Positives = 83/93 (89%)
 Frame = -1

Query: 280 QLTLSGMLNFVDGLWSSCGDERIIVFTTNNKDRLDPALLRPGRMDVHIHMSYCDPCGFRV 101
           QLTLSG+LNF+DGLWSSCGDERIIVFTTN+KDR+DPALLRPGRMD+HIHMSYC P GF+ 
Sbjct: 382 QLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIHMSYCTPYGFKT 441

Query: 100 LANNYLEVSNHPVFDEIERLLEITNVTPAEVAE 2
           LA+NYL VSNH +F EIERL+    VTPAE+AE
Sbjct: 442 LASNYLGVSNHRLFTEIERLITEVEVTPAEIAE 474


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