BLASTX nr result

ID: Coptis21_contig00032599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032599
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   125   5e-27
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              125   5e-27
emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]   124   1e-26
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   120   1e-25
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   120   2e-25

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = -1

Query: 232 LCPHLVIIPYNFEAYEVVADQFYDILHKYCSRVQAVSCDEAFLDVTDRVDEDAEHIASVI 53
           LCPHLVI PYNFEAYE VADQFY+ILHK+C++VQAVSCDEAFL+V D  + D E +AS+I
Sbjct: 460 LCPHLVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKEGDPELLASII 519

Query: 52  RQEIFEATGCTSSAGVA 2
           R+EIFE TGCT+SAG+A
Sbjct: 520 RKEIFETTGCTASAGIA 536


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = -1

Query: 232 LCPHLVIIPYNFEAYEVVADQFYDILHKYCSRVQAVSCDEAFLDVTDRVDEDAEHIASVI 53
           LCPHLVI PYNFEAYE VADQFY+ILHK+C++VQAVSCDEAFL+V D  + D E +AS+I
Sbjct: 438 LCPHLVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKEGDPELLASII 497

Query: 52  RQEIFEATGCTSSAGVA 2
           R+EIFE TGCT+SAG+A
Sbjct: 498 RKEIFETTGCTASAGIA 514


>emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]
          Length = 500

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 67/77 (87%)
 Frame = -1

Query: 232 LCPHLVIIPYNFEAYEVVADQFYDILHKYCSRVQAVSCDEAFLDVTDRVDEDAEHIASVI 53
           LCPHLVI PYNFEAYE VADQFY+ILHK+C++VQAVSCDEAFL+V D    D E +AS+I
Sbjct: 313 LCPHLVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKXGDPELLASII 372

Query: 52  RQEIFEATGCTSSAGVA 2
           R+EIFE TGCT+SAG+A
Sbjct: 373 RKEIFETTGCTASAGIA 389


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 LCPHLVIIPYNFEAYEVVADQFYDILHKYCSRVQAVSCDEAFLDVTDRVDEDAEHIASVI 53
           LCP L+I PYNF+AYE VADQFY++LHK+C++VQAVSCDEAFLD+TD    D E +AS I
Sbjct: 429 LCPQLIIFPYNFQAYEEVADQFYNVLHKHCNKVQAVSCDEAFLDITDFSGGDPEVLASTI 488

Query: 52  RQEIFEATGCTSSAGVA 2
           R+EIFE TGCT+SAG+A
Sbjct: 489 RKEIFETTGCTASAGIA 505


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/77 (72%), Positives = 64/77 (83%)
 Frame = -1

Query: 232 LCPHLVIIPYNFEAYEVVADQFYDILHKYCSRVQAVSCDEAFLDVTDRVDEDAEHIASVI 53
           LCPHLVI PYNFEAYE VADQFY ILH+ C +VQAVSCDEAFLD TD   ED E +AS I
Sbjct: 443 LCPHLVIFPYNFEAYEEVADQFYSILHQRCKKVQAVSCDEAFLDATDSEVEDPELLASSI 502

Query: 52  RQEIFEATGCTSSAGVA 2
           R+EI++ TGCT+SAG+A
Sbjct: 503 REEIYKTTGCTASAGIA 519


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