BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032583
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   124   8e-27
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   122   4e-26
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]   108   3e-22
emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera]   106   2e-21
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   106   2e-21

>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/115 (52%), Positives = 79/115 (68%)
 Frame = +2

Query: 2   TLSWDFLLEVLKRLGFGQRWIDWVYTILGSAKLSVLINGGPCGYMEVGRGLRQGDPLSPL 181
           TL+W FLL+VLK+ GF + + +W+  IL SAKLS+ ING   GY    RG+RQGDPLSPL
Sbjct: 269 TLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICINGSQQGYFSCSRGVRQGDPLSPL 328

Query: 182 LFALAEDVLSKGLNYLRDNGLIKPLCTAKGYPSPSHLLFADDIFIFMNGNLREVK 346
           LF LAEDVLS+ L  L + G +K +   +    PSH+L+ADDI IF NG + + +
Sbjct: 329 LFCLAEDVLSRSLTKLVEQGKLKQMRGTRNCLVPSHILYADDIMIFCNGGISDAR 383


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/117 (47%), Positives = 79/117 (67%)
 Frame = +2

Query: 2   TLSWDFLLEVLKRLGFGQRWIDWVYTILGSAKLSVLINGGPCGYMEVGRGLRQGDPLSPL 181
           TL W+FLL VL+R GF ++++ W+  IL SA+LSVL+NG   G+     G+RQGDPLSPL
Sbjct: 595 TLDWNFLLAVLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPL 654

Query: 182 LFALAEDVLSKGLNYLRDNGLIKPLCTAKGYPSPSHLLFADDIFIFMNGNLREVKNL 352
           LF L E+VLS+ L+    +G + P+   +G   P+H+L+ADD+ IF  G  R ++ L
Sbjct: 655 LFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPTHILYADDVLIFCTGTKRNIRRL 711


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
 Frame = +2

Query: 2    TLSWDFLLEVLKRLGFGQRWIDWVYTILGSAKLSVLINGGPCGYMEVGRGLRQGDPLSPL 181
            +L+W+FL++VL+++GFG RW+DW++  + +AK S+LING P G+    +GLRQGDPLSP 
Sbjct: 1266 SLNWEFLMKVLRKMGFGSRWMDWMWWCISTAKFSILINGVPAGFFPNSKGLRQGDPLSPY 1325

Query: 182  LFALAEDVLSKGLNYLRDNGLIKPLCTAKG----YPSPSHLLFADDIFIFMNGNLREVKN 349
            LF L  +VLS       + G +   C  +G      + SHLLFADD  IF      +V N
Sbjct: 1326 LFILGMEVLSTLFRRAGEGGFLSG-CRLRGRGGVEMNVSHLLFADDTIIFCKAEREQVTN 1384

Query: 350  LT 355
            L+
Sbjct: 1385 LS 1386


>emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera]
          Length = 2935

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
 Frame = +2

Query: 2    TLSWDFLLEVLKRLGFGQRWIDWVYTILGSAKLSVLINGGPCGYMEVGRGLRQGDPLSPL 181
            +++W FL++VL+++GFG RW+DW++  + +AK S+LING P G+    +GLRQGDPLSP 
Sbjct: 2546 SINWKFLMKVLRKMGFGSRWMDWMWWCISTAKFSILINGVPVGFFSNSKGLRQGDPLSPY 2605

Query: 182  LFALAEDVLSKGLNYLRDNGLIKPLCTAKGYP----SPSHLLFADDIFIFMNGNLREVKN 349
            LF L  + LS  L    + G +   C  +G      + SHLLFADD  IF      ++ N
Sbjct: 2606 LFVLGMEXLSTLLRXAGEGGFLSN-CRLRGRXGEELTVSHLLFADDTIIFCKARREQLTN 2664

Query: 350  LT 355
            L+
Sbjct: 2665 LS 2666


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/111 (43%), Positives = 71/111 (63%)
 Frame = +2

Query: 2   TLSWDFLLEVLKRLGFGQRWIDWVYTILGSAKLSVLINGGPCGYMEVGRGLRQGDPLSPL 181
           TL+WDFLL VLK  GF + + +W+ TIL S+K+ + +NG   G+    RG+RQGDPLSPL
Sbjct: 330 TLNWDFLLLVLKTFGFNELFCNWIKTILHSSKMFISMNGAQHGFFNCNRGVRQGDPLSPL 389

Query: 182 LFALAEDVLSKGLNYLRDNGLIKPLCTAKGYPSPSHLLFADDIFIFMNGNL 334
           LF + E+VLS+ ++ L D GLI  +  ++    P H  + DD+ +F    +
Sbjct: 390 LFCIVEEVLSRSISILADKGLIDLIAASRNNCLPFHCFYVDDLMVFCKAKM 440