BLASTX nr result

ID: Coptis21_contig00032578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032578
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520840.1| PREDICTED: uncharacterized protein LOC100798...    44   8e-07
ref|NP_001242105.1| uncharacterized protein LOC100793914 [Glycin...    42   4e-06
gb|ABK94412.1| unknown [Populus trichocarpa]                           40   9e-06

>ref|XP_003520840.1| PREDICTED: uncharacterized protein LOC100798118 [Glycine max]
          Length = 678

 Score = 43.9 bits (102), Expect(2) = 8e-07
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = -1

Query: 472 LLQKFDVAADAFLMGLKLNPENKELQDAF 386
           LLQKFD AA+AF  G+KL+PENKEL +AF
Sbjct: 632 LLQKFDEAANAFYEGVKLDPENKELVNAF 660



 Score = 34.7 bits (78), Expect(2) = 8e-07
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 573 KACIRLRPNWPEPYYRAGIALSLL 502
           KAC  LRP+WP+  YR G AL LL
Sbjct: 610 KACRALRPDWPKACYREGAALRLL 633


>ref|NP_001242105.1| uncharacterized protein LOC100793914 [Glycine max]
           gi|255635001|gb|ACU17859.1| unknown [Glycine max]
          Length = 460

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -1

Query: 472 LLQKFDVAADAFLMGLKLNPENKELQDAF 386
           LLQKFD AA+AF  G+ L+PENKEL +AF
Sbjct: 414 LLQKFDEAANAFYEGVTLDPENKELVNAF 442



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 573 KACIRLRPNWPEPYYRAGIALSLL 502
           KAC  LRP+WP+  YR G AL LL
Sbjct: 392 KACRALRPDWPKACYREGAALRLL 415


>gb|ABK94412.1| unknown [Populus trichocarpa]
          Length = 167

 Score = 39.7 bits (91), Expect(2) = 9e-06
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -1

Query: 472 LLQKFDVAADAFLMGLKLNPENKELQDAF 386
           LLQ+FD AA++F  G+KL+PENKEL  +F
Sbjct: 121 LLQRFDEAANSFYEGVKLDPENKELVKSF 149



 Score = 35.4 bits (80), Expect(2) = 9e-06
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 573 KACIRLRPNWPEPYYRAGIALSLL 502
           KAC  L+P+WP+ +YR G AL LL
Sbjct: 99  KACRELKPDWPKAWYREGAALRLL 122


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