BLASTX nr result

ID: Coptis21_contig00032575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032575
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273425.1| PREDICTED: mRNA-decapping enzyme-like protei...    67   1e-09
ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protei...    66   3e-09
gb|AFK41151.1| unknown [Medicago truncatula]                           65   4e-09
ref|XP_003596866.1| mRNA-decapping enzyme-like protein [Medicago...    65   4e-09
ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycin...    60   1e-07

>ref|XP_002273425.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
           gi|296084878|emb|CBI28287.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
 Frame = -2

Query: 339 KVPPKLKISSTKSDFEESETV-GKNVMEVLLESPSSNYTAPNIANTPEDSSFLKFFXXXX 163
           KVPPK K+SSTKS+FEE E V    VM+  LE  SS  T+ N+A+ P+D SF+ FF    
Sbjct: 139 KVPPKTKVSSTKSEFEELEAVPTMAVMDGPLEPSSS--TSSNVADVPDDPSFVNFFSEAV 196

Query: 162 XXXXXXXXXNPGQ-YQPPAVIPPSFRSPN-VPITVPALEIPYAPSPRSAPSLP 10
                      GQ YQ  A  P     PN +P TVP L++   P   S   +P
Sbjct: 197 TIGNASSVAVTGQPYQSSATPPLPSCPPNAIPGTVPTLQLASPPQSTSTSLIP 249


>ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
           gi|297740156|emb|CBI30338.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
 Frame = -2

Query: 339 KVPPKLKISSTKSDFEESETV-GKNVMEVLLESPSSNYTAPNIANTPEDSSFLKFF-XXX 166
           KVPPK K+SS+KS+FEE E V    VME +LE PSS  TA    + PEDS+F+ FF    
Sbjct: 139 KVPPKPKLSSSKSEFEELEAVPTMAVMEGMLE-PSS--TASATTDAPEDSTFVNFFGAAM 195

Query: 165 XXXXXXXXXXNPGQ-YQPPAVIPPSFRSPN-VPITVPALEIPYAP-SPRSAPSLP 10
                     N GQ YQP   +P    +P+ VP  VP L++P  P S  S P LP
Sbjct: 196 NIGSNTSNVANSGQSYQPSITVPSFSHAPSVVPSPVPTLQVPSLPRSASSTPPLP 250


>gb|AFK41151.1| unknown [Medicago truncatula]
          Length = 279

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 51/116 (43%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
 Frame = -2

Query: 339 KVPPKLKISSTKSDFEESETV-GKNVMEVLLESPSSNYTAPNIANTPEDSSFLKFFXXXX 163
           KVPPKLK+SSTKS+FEE E V    VM+  LE PSS+ T+ N+A+ P+D SF+ FF    
Sbjct: 139 KVPPKLKVSSTKSEFEELEAVPTMAVMDGPLE-PSSSITS-NVADVPDDPSFINFFSAAM 196

Query: 162 XXXXXXXXXNPGQ-YQPPAVI----PPSFRSPNVPITVPALEIPYAPSPRSAPSLP 10
                      GQ YQ  A I    P    +P VP+  P L+IP  P+  S P  P
Sbjct: 197 GIGNTSNAPITGQPYQSSATISSSGPTHAATPVVPL--PTLQIPSLPT--STPFTP 248


>ref|XP_003596866.1| mRNA-decapping enzyme-like protein [Medicago truncatula]
           gi|355485914|gb|AES67117.1| mRNA-decapping enzyme-like
           protein [Medicago truncatula]
          Length = 366

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 51/116 (43%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
 Frame = -2

Query: 339 KVPPKLKISSTKSDFEESETV-GKNVMEVLLESPSSNYTAPNIANTPEDSSFLKFFXXXX 163
           KVPPKLK+SSTKS+FEE E V    VM+  LE PSS+ T+ N+A+ P+D SF+ FF    
Sbjct: 139 KVPPKLKVSSTKSEFEELEAVPTMAVMDGPLE-PSSSITS-NVADVPDDPSFINFFSAAM 196

Query: 162 XXXXXXXXXNPGQ-YQPPAVI----PPSFRSPNVPITVPALEIPYAPSPRSAPSLP 10
                      GQ YQ  A I    P    +P VP+  P L+IP  P+  S P  P
Sbjct: 197 GIGNTSNAPITGQPYQSSATISSSGPTHAATPVVPL--PTLQIPSLPT--STPFTP 248


>ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycine max]
           gi|255636473|gb|ACU18575.1| unknown [Glycine max]
           gi|255641041|gb|ACU20800.1| unknown [Glycine max]
          Length = 368

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 47/113 (41%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = -2

Query: 339 KVPPKLKISSTKSDFEESETV-GKNVMEVLLESPSSNYTAPNIANTPEDSSFLKFFXXXX 163
           KVPPK K+SSTKS+FEE E V    VM+  LE  SS  T  N+A+ P+D SF+ FF    
Sbjct: 139 KVPPKSKVSSTKSEFEELEAVPTMAVMDGPLEPSSS--TTSNVADVPDDPSFVNFFSAAM 196

Query: 162 XXXXXXXXXNPGQ-YQPPAVI-PPSFRSPNVPITVPALEIPYAPSPRSAPSLP 10
                      GQ YQ  A I   S  +     TVP L+IP     +S P +P
Sbjct: 197 AIGNTSNTPITGQPYQSSAAISSSSVPTHTATPTVPTLQIP--SLSQSTPLIP 247


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