BLASTX nr result

ID: Coptis21_contig00032524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032524
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [C...    79   3e-13
ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like...    75   4e-12
emb|CBI40723.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|NP_195458.1| uncharacterized protein [Arabidopsis thaliana] ...    73   2e-11
ref|XP_002868989.1| hypothetical protein ARALYDRAFT_912599 [Arab...    66   3e-09

>ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus]
           gi|449489430|ref|XP_004158309.1| PREDICTED: UPF0392
           protein At1g27200-like [Cucumis sativus]
          Length = 577

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
 Frame = -3

Query: 287 CVFSNGD---KTPVISSVQEVFRCHHPSYRKNIEEDEKYIKVSLEISENSNRXXXXXXXX 117
           CVF +GD   +T V SSVQEVFRC HP+   +  ED    K++LEI +   +        
Sbjct: 219 CVFGDGDDAIRTAVTSSVQEVFRCRHPNLTTS--EDHDKFKITLEILDARGKNILVPSVA 276

Query: 116 XXXXAQRR----IVEKKEKSLICACTMVYNVAKFLKEWVVYH 3
                +      +VE + +S+ICACTMVYNV KFL+EWV+Y+
Sbjct: 277 YYSPRRSGDGGGLVETEAQSMICACTMVYNVGKFLREWVMYY 318


>ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 595

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = -3

Query: 287 CVFSNGD----KTPVISSVQEVFRCHHPSYR--KNIEEDEKYIKVSLEISENSNRXXXXX 126
           CVF N      +T V +S QEVFRC HP  R   + E + + IK+SLEIS+ +       
Sbjct: 240 CVFGNDATIAVRTAVTTSSQEVFRCRHPDLRALSHGEIENERIKISLEISDENR----VV 295

Query: 125 XXXXXXXAQRRIVEKKEKSLICACTMVYNVAKFLKEWVVYH 3
                    R +   + KS +CA TM+YN AKFLKEWVVYH
Sbjct: 296 PSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYH 336


>emb|CBI40723.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = -3

Query: 287 CVFSNGD----KTPVISSVQEVFRCHHPSYR--KNIEEDEKYIKVSLEISENSNRXXXXX 126
           CVF N      +T V +S QEVFRC HP  R   + E + + IK+SLEIS+ +       
Sbjct: 210 CVFGNDATIAVRTAVTTSSQEVFRCRHPDLRALSHGEIENERIKISLEISDENR----VV 265

Query: 125 XXXXXXXAQRRIVEKKEKSLICACTMVYNVAKFLKEWVVYH 3
                    R +   + KS +CA TM+YN AKFLKEWVVYH
Sbjct: 266 PSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYH 306


>ref|NP_195458.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4468808|emb|CAB38209.1| putative protein [Arabidopsis
           thaliana] gi|7270724|emb|CAB80407.1| putative protein
           [Arabidopsis thaliana] gi|332661391|gb|AEE86791.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 588

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
 Frame = -3

Query: 287 CVFSNGD----KTPVISSVQEVFRCHHPSYRKNIEEDEKYIKVSLEISENSNRXXXXXXX 120
           CVF        +T V SSVQEVFRC  P    NI  D   +K+ LE              
Sbjct: 237 CVFGEESDTAIRTAVTSSVQEVFRCSLP----NITIDTP-VKIYLEAVATGKEETKTVPS 291

Query: 119 XXXXXAQRRIVEKKEKSLICACTMVYNVAKFLKEWVVYH 3
                 +R +VE +EKSL+CA TMVYNVAK+L+EWV+YH
Sbjct: 292 VAYYSPKRTLVEPREKSLLCATTMVYNVAKYLREWVMYH 330


>ref|XP_002868989.1| hypothetical protein ARALYDRAFT_912599 [Arabidopsis lyrata subsp.
           lyrata] gi|297314825|gb|EFH45248.1| hypothetical protein
           ARALYDRAFT_912599 [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
 Frame = -3

Query: 287 CVFSNGD----KTPVISSVQEVFRCHHPSYRKNIEEDEKYIKVSLEISENSNRXXXXXXX 120
           CVF        +T V SSVQEVFRC  P    +       IK+ LE              
Sbjct: 237 CVFGEESDTAIRTAVTSSVQEVFRCSLPDITIDTP-----IKIYLEAVATDKEETKTIPS 291

Query: 119 XXXXXAQRRIVEKKEKSLICACTMVYNVAKFLKEWVVYH 3
                 +  + E +EK L+CA TMVYNVAK+L+EWV+YH
Sbjct: 292 VAYYTPKHTLAEPREKVLLCATTMVYNVAKYLREWVMYH 330


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