BLASTX nr result

ID: Coptis21_contig00032517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032517
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ06702.1| unnamed protein product [Solanum lycopersicum]         61   8e-08
ref|XP_002453403.1| hypothetical protein SORBIDRAFT_04g005390 [S...    60   2e-07
ref|XP_002446233.1| hypothetical protein SORBIDRAFT_06g007340 [S...    55   6e-06

>dbj|BAJ06702.1| unnamed protein product [Solanum lycopersicum]
          Length = 718

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
 Frame = -2

Query: 464 IVLQTLCCSCEGAYTK-VKTPTKKREERRFSCMAKFQTTLNREGKYVLSKLIVEHTHGLV 288
           I+ Q   CS EG  +K      K+R+E R  C      +   E K+V+++L++ H H L 
Sbjct: 60  IIGQEFVCSKEGFRSKKCLESNKQRDETREGCKVMIYMSKKEEEKWVIARLVLNHNHELA 119

Query: 287 K--------------DSQAGIMKKMRDSRLKPADIYYYFCSEVGGAENLNFIKSDCNNLL 150
                          ++Q  ++  + +S ++P+ I     ++ GG ENLN    D  N L
Sbjct: 120 SPNSQKFLRSKRKKSEAQKNLIDLLNNSGIRPSKIASVLTTQAGGIENLNITGRDIQNYL 179

Query: 149 QMVREEIRKKG*CSLSF*FFQTKET 75
              R+   +KG   L   +FQ +++
Sbjct: 180 STKRQNCLEKGDAQLMLKYFQKRQS 204


>ref|XP_002453403.1| hypothetical protein SORBIDRAFT_04g005390 [Sorghum bicolor]
           gi|241933234|gb|EES06379.1| hypothetical protein
           SORBIDRAFT_04g005390 [Sorghum bicolor]
          Length = 429

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
 Frame = -2

Query: 449 LCCSCEGAYTKVKTPTKKREERRFSCMAKFQTTLNREGKYVLSKLIVEHTHGL------- 291
           + CS +G   + +  + +++  R  C A+ Q ++++EG + + K++ EH H L       
Sbjct: 138 MVCSSQG---QRENESSQKDNTRTGCNARVQFSISKEGIWTVQKVVEEHNHYLASPNKKH 194

Query: 290 -------VKDSQAGIMKKMRDSRLKPADIYYYFCSEVGGAENLNFIKSDCNNLLQMVREE 132
                  V ++   ++ ++R++ +KPA IY +     GG EN+ F K+DCNN +   R +
Sbjct: 195 KLRSQRKVIEADRKLIGQIREAGMKPAQIYEFMKEFYGGEENIPFAKTDCNNEIGRERRQ 254


>ref|XP_002446233.1| hypothetical protein SORBIDRAFT_06g007340 [Sorghum bicolor]
           gi|241937416|gb|EES10561.1| hypothetical protein
           SORBIDRAFT_06g007340 [Sorghum bicolor]
          Length = 371

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
 Frame = -2

Query: 482 RGDHTKIVLQTLCCSCEGAYTKVKT--PTKKREERRFSCMAKFQTTLNREGKYVLSKLIV 309
           R D T +  + + CS +G   K  +   +K+    R  C A+ Q +++REG + + K++ 
Sbjct: 95  RADKT-LYQKHIVCSNQGERGKHSSHETSKENATTRICCNARVQFSVSREGIWKVQKVVF 153

Query: 308 EHTHGLVKDSQAG--------------IMKKMRDSRLKPADIYYYFCSEVGGAENLNFIK 171
           +H H     ++A               ++ ++R + + PA +Y +F    GG EN+ F +
Sbjct: 154 DHNHYFASPNKAHKLRSQRRITEVDKQLISQIRGAGILPAQVYEFFKQWYGGVENVPFAQ 213

Query: 170 SDCNNLLQMVREE 132
            DC+NL+   R++
Sbjct: 214 MDCSNLIGRERKK 226


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