BLASTX nr result

ID: Coptis21_contig00032358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032358
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285509.1| PREDICTED: GDSL esterase/lipase At3g26430 [V...   135   3e-30
ref|XP_002285512.1| PREDICTED: GDSL esterase/lipase At3g26430 [V...   135   3e-30
ref|XP_004135278.1| PREDICTED: GDSL esterase/lipase At3g26430-li...   132   4e-29
ref|XP_002314590.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_002530042.1| Alpha-L-fucosidase 2 precursor, putative [Ri...   128   4e-28

>ref|XP_002285509.1| PREDICTED: GDSL esterase/lipase At3g26430 [Vitis vinifera]
           gi|296081364|emb|CBI16797.3| unnamed protein product
           [Vitis vinifera]
          Length = 381

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/90 (71%), Positives = 75/90 (83%)
 Frame = -2

Query: 270 LHFLTLLSVLITVLYLSTPSSAECNFPAIFNFGDSNSDTGGLSAAFGQAPPPSGETYFHT 91
           L FLTL   + +V +L   ++  C+FPAIFNFGDSNSDTGGLSA +GQAPPP+GET+FH 
Sbjct: 5   LFFLTLTISVSSVPWLVLATATSCDFPAIFNFGDSNSDTGGLSAVYGQAPPPNGETFFHK 64

Query: 90  PSGRYSDGRLVIDFIAETFGLPYLSAYLDA 1
           P+GRYSDGRLVIDF+AE  GLPYLSAYLDA
Sbjct: 65  PAGRYSDGRLVIDFMAERLGLPYLSAYLDA 94


>ref|XP_002285512.1| PREDICTED: GDSL esterase/lipase At3g26430 [Vitis vinifera]
           gi|296081363|emb|CBI16796.3| unnamed protein product
           [Vitis vinifera]
          Length = 383

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/94 (73%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
 Frame = -2

Query: 276 MELHFLTLLSVLITVLYLSTPS--SAECNFPAIFNFGDSNSDTGGLSAAFGQAPPPSGET 103
           MEL    LLS  I V +   PS  SA C FPA+FNFGDSNSDTGGLSAAFGQA PP+GET
Sbjct: 1   MELRLRILLS-FIAVAFSVEPSKVSATCEFPAVFNFGDSNSDTGGLSAAFGQAGPPAGET 59

Query: 102 YFHTPSGRYSDGRLVIDFIAETFGLPYLSAYLDA 1
           YFH P+GRYSDGRL+IDFIAE+ GLPYLSA+LDA
Sbjct: 60  YFHAPAGRYSDGRLIIDFIAESVGLPYLSAFLDA 93


>ref|XP_004135278.1| PREDICTED: GDSL esterase/lipase At3g26430-like [Cucumis sativus]
           gi|449520693|ref|XP_004167368.1| PREDICTED: GDSL
           esterase/lipase At3g26430-like [Cucumis sativus]
          Length = 384

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
 Frame = -2

Query: 291 LPSHSMELHFLTLLSVLITVLYLSTPSSAE--CNFPAIFNFGDSNSDTGGLSAAFGQAPP 118
           + SHS+ + F T L++ +T      P+ A+  CNFPA+FNFGDSNSDTGGLSA FGQAPP
Sbjct: 1   MESHSLIIAFTTFLALSLT----PWPALAKDPCNFPAVFNFGDSNSDTGGLSAVFGQAPP 56

Query: 117 PSGETYFHTPSGRYSDGRLVIDFIAETFGLPYLSAYLDA 1
           P+G +YF  P+GRYSDGRL++DFIAE+FGLP+LSAYLDA
Sbjct: 57  PNGRSYFPGPAGRYSDGRLIVDFIAESFGLPHLSAYLDA 95


>ref|XP_002314590.1| predicted protein [Populus trichocarpa] gi|222863630|gb|EEF00761.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = -2

Query: 291 LPSHSMELHFLTLLSVLITVLYLSTPSSAECNFPAIFNFGDSNSDTGGLSAAFGQAPPPS 112
           LPS    +   TLL  LI+ +     +++ C+FPAIFNFGDSNSDTGGLSA FGQAPPP 
Sbjct: 3   LPSSVSVVSIFTLL--LISTVQWVAFATSPCHFPAIFNFGDSNSDTGGLSAVFGQAPPPH 60

Query: 111 GETYFHTPSGRYSDGRLVIDFIAETFGLPYLSAYLDA 1
           GE+YFH P+GRY DGRL+IDFIA++FGLPYLSAYLD+
Sbjct: 61  GESYFHHPAGRYCDGRLIIDFIAKSFGLPYLSAYLDS 97


>ref|XP_002530042.1| Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
           gi|223530458|gb|EEF32342.1| Alpha-L-fucosidase 2
           precursor, putative [Ricinus communis]
          Length = 390

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 5/86 (5%)
 Frame = -2

Query: 243 LITVLYLSTPSS-----AECNFPAIFNFGDSNSDTGGLSAAFGQAPPPSGETYFHTPSGR 79
           LI  L  S P S     + C+FPAIFNFGDSNSDTGGLSAAFGQAPPP+G T+FH P+GR
Sbjct: 15  LIVSLASSLPKSRASQKSSCHFPAIFNFGDSNSDTGGLSAAFGQAPPPNGHTFFHHPAGR 74

Query: 78  YSDGRLVIDFIAETFGLPYLSAYLDA 1
           +SDGRL+IDFIAE+ GLPYLSAYLD+
Sbjct: 75  FSDGRLIIDFIAESLGLPYLSAYLDS 100


Top