BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032226
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             114   6e-24
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             114   1e-23
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid...   112   4e-23
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...   111   7e-23
emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]   108   3e-22

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/100 (52%), Positives = 77/100 (77%)
 Frame = +2

Query: 2   PVYFLSRTLLPAETRYPKLERVALALVFAAEKLRPYFQSHTIRVISEYPLRAVLARPNKS 181
           P+Y++S+++   ETRY  +E++ALA+V +A KLRPYFQSH ++V++  PLR +L  P++S
Sbjct: 343 PIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTNQPLRTILHSPSQS 402

Query: 182 GRLAKWSIQLSEHDILYVPRISEKGQALAEFLGDFPITYT 301
           GRLAKW+++LSE+DI +  RIS K Q LA+FL + PI  T
Sbjct: 403 GRLAKWAVELSEYDIEFKSRISMKAQVLADFLTELPIPGT 442


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/97 (52%), Positives = 76/97 (78%)
 Frame = +2

Query: 2    PVYFLSRTLLPAETRYPKLERVALALVFAAEKLRPYFQSHTIRVISEYPLRAVLARPNKS 181
            P+++ S++L+ AETRYP +E+ ALA+V +A KLRPYFQSHTI V+++ PLR  L  P++S
Sbjct: 1146 PIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQPLRVALHSPSQS 1205

Query: 182  GRLAKWSIQLSEHDILYVPRISEKGQALAEFLGDFPI 292
            GR+ KW+++LSE+DI + PR + K Q LA+FL + P+
Sbjct: 1206 GRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPL 1242


>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1212

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/103 (51%), Positives = 75/103 (72%)
 Frame = +2

Query: 2   PVYFLSRTLLPAETRYPKLERVALALVFAAEKLRPYFQSHTIRVISEYPLRAVLARPNKS 181
           P++++S++    ETRYP +E++ALA+V AA KLRPYFQSH I V++  PLR +L  PN+S
Sbjct: 643 PIFYVSKSFSDVETRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSLPLRTILHSPNQS 702

Query: 182 GRLAKWSIQLSEHDILYVPRISEKGQALAEFLGDFPITYTGYD 310
           GRLAKW+I+LSE ++ +  R S K Q LA+FL + P+  T  D
Sbjct: 703 GRLAKWAIELSEFNLEFHARTSLKSQVLADFLIELPLATTASD 745


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/97 (53%), Positives = 75/97 (77%)
 Frame = +2

Query: 2    PVYFLSRTLLPAETRYPKLERVALALVFAAEKLRPYFQSHTIRVISEYPLRAVLARPNKS 181
            P++++S++   AETRYP +E++ALA+V +A KLRPYFQSH I V++  PLRA+L  P++S
Sbjct: 815  PIFYVSKSFSDAETRYPMMEKLALAVVTSARKLRPYFQSHPIVVLTSLPLRAILHSPSQS 874

Query: 182  GRLAKWSIQLSEHDILYVPRISEKGQALAEFLGDFPI 292
            GRLAKW+I+LSE D+ +  R S K Q LA+FL + P+
Sbjct: 875  GRLAKWAIELSEFDLEFRARTSLKSQVLADFLIELPL 911


>emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]
          Length = 622

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/96 (53%), Positives = 71/96 (73%)
 Frame = +2

Query: 2   PVYFLSRTLLPAETRYPKLERVALALVFAAEKLRPYFQSHTIRVISEYPLRAVLARPNKS 181
           PVYF+S+ L   ETRY ++E+ ALAL  AA+KLRPYFQ+H I V++  PLR VL +P+ +
Sbjct: 196 PVYFISKALADTETRYSRMEQTALALRTAAQKLRPYFQAHPITVLTNQPLRNVLHKPDIT 255

Query: 182 GRLAKWSIQLSEHDILYVPRISEKGQALAEFLGDFP 289
           GR+ +W I+LSE+ I Y PR+S KGQ +A+F+   P
Sbjct: 256 GRMLRWVIELSEYGIDYQPRLSLKGQVMADFIAXLP 291