BLASTX nr result

ID: Coptis21_contig00031995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031995
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   132   4e-29
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   130   9e-29
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   130   9e-29

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/70 (91%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    LDNQGIDVADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGSAMVKDKGLRC 180
            LDNQG D+ DSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLG  MVKDKGLRC
Sbjct: 988  LDNQGKDIVDSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRC 1047

Query: 181  QYIVACEPQG 210
            QYIVACEP+G
Sbjct: 1048 QYIVACEPRG 1057


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/70 (91%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    LDNQGIDVADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGSAMVKDKGLRC 180
            LDNQG D+ DSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLG  MVKDKGLRC
Sbjct: 1462 LDNQGKDIVDSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRC 1521

Query: 181  QYIVACEPQG 210
            QYIVACEP+G
Sbjct: 1522 QYIVACEPRG 1531


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = +1

Query: 1    LDNQGIDVADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGSAMVKDKGLRC 180
            LDNQG D+ADSELLDYISESSTMSKSL+DYG+QKSCAVTTARRLADFLG  MVKDKGLRC
Sbjct: 989  LDNQGKDIADSELLDYISESSTMSKSLSDYGQQKSCAVTTARRLADFLGDTMVKDKGLRC 1048

Query: 181  QYIVACEPQG 210
            QYIVACEP+G
Sbjct: 1049 QYIVACEPRG 1058


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    LDNQGIDVADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGSAMVKDKGLRC 180
            LDNQG D+ADSELLDYISESSTMSKSL DYGEQKSCAVTTARRLADFLG  MV+DKGLRC
Sbjct: 988  LDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGDTMVRDKGLRC 1047

Query: 181  QYIVACEPQG 210
            QYIVACEP+G
Sbjct: 1048 QYIVACEPKG 1057


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    LDNQGIDVADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGSAMVKDKGLRC 180
            LDNQG D+ADSELLDYISESSTMSKSL DYGEQKSCAVTTARRLADFLG  MV+DKGLRC
Sbjct: 988  LDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGDTMVRDKGLRC 1047

Query: 181  QYIVACEPQG 210
            QYIVACEP+G
Sbjct: 1048 QYIVACEPKG 1057


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