BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031994
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   159   2e-37
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   158   4e-37
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   157   9e-37
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   156   1e-36
ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   156   2e-36

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/97 (80%), Positives = 89/97 (91%), Gaps = 2/97 (2%)
 Frame = -1

Query: 292  VAIFES-AE-MKTFMRKWCKISADMGIRSIIDWSYYKQRLSSTIQKIITIPAAMQKVANP 119
            VAIFE+ AE MK ++RKWCKIS+D+GIRSI+DWSYYKQRL S IQKIITIPAAMQKVANP
Sbjct: 1067 VAIFETDAEIMKFYVRKWCKISSDVGIRSIVDWSYYKQRLGSAIQKIITIPAAMQKVANP 1126

Query: 118  VPRVIHPDWLHKKVREKDDKFRQRKLVDMFSPLKKGD 8
            VPRV+HPDWL+KKVREK++KFRQRKLVDMF  LK+ D
Sbjct: 1127 VPRVVHPDWLYKKVREKEEKFRQRKLVDMFGSLKRDD 1163


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/97 (78%), Positives = 88/97 (90%), Gaps = 2/97 (2%)
 Frame = -1

Query: 292  VAIFES-AE-MKTFMRKWCKISADMGIRSIIDWSYYKQRLSSTIQKIITIPAAMQKVANP 119
            VAIFE+ AE MK ++RKWCK+S+D+GIRSI+DWSYYKQRLSS IQKIITIPAAMQKVANP
Sbjct: 1078 VAIFETDAEVMKFYVRKWCKVSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANP 1137

Query: 118  VPRVIHPDWLHKKVREKDDKFRQRKLVDMFSPLKKGD 8
            VPRV+HPDWLHKKVREK+DKFRQRKLVD F  + + +
Sbjct: 1138 VPRVVHPDWLHKKVREKEDKFRQRKLVDAFKSMNRNE 1174


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  157 bits (397), Expect = 9e-37
 Identities = 79/97 (81%), Positives = 86/97 (88%), Gaps = 2/97 (2%)
 Frame = -1

Query: 292  VAIFES-AE-MKTFMRKWCKISADMGIRSIIDWSYYKQRLSSTIQKIITIPAAMQKVANP 119
            VAIFE+ AE MK ++RKWCK S D+GIRSIIDWSYYKQRLSS IQKIITIPAAMQKVANP
Sbjct: 1069 VAIFETDAEIMKFYLRKWCKTSTDIGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANP 1128

Query: 118  VPRVIHPDWLHKKVREKDDKFRQRKLVDMFSPLKKGD 8
            VPRV+HPDWLHKKVREK+DKFRQRKLVD+F    K D
Sbjct: 1129 VPRVVHPDWLHKKVREKEDKFRQRKLVDIFRLSSKED 1165


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/97 (76%), Positives = 86/97 (88%), Gaps = 2/97 (2%)
 Frame = -1

Query: 292  VAIFESAE--MKTFMRKWCKISADMGIRSIIDWSYYKQRLSSTIQKIITIPAAMQKVANP 119
            VAIFE+    MK ++RKWCK+S+D+GIRSIIDWSYYKQRLSS+IQKIITIPAAMQKVANP
Sbjct: 1081 VAIFETDADIMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLSSSIQKIITIPAAMQKVANP 1140

Query: 118  VPRVIHPDWLHKKVREKDDKFRQRKLVDMFSPLKKGD 8
            VPRV+HPDWLHKKVREK+DKFRQRK+ D F  + K +
Sbjct: 1141 VPRVVHPDWLHKKVREKEDKFRQRKIDDTFKSMNKNE 1177


>ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Glycine max]
          Length = 2205

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/97 (78%), Positives = 87/97 (89%), Gaps = 2/97 (2%)
 Frame = -1

Query: 292  VAIFES-AE-MKTFMRKWCKISADMGIRSIIDWSYYKQRLSSTIQKIITIPAAMQKVANP 119
            VAIFE+ AE MK ++RKWCK+S+D+ IRSIIDWSYYKQRLSS IQKIITIPAAMQKVANP
Sbjct: 1077 VAIFETDAEVMKFYVRKWCKVSSDVDIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANP 1136

Query: 118  VPRVIHPDWLHKKVREKDDKFRQRKLVDMFSPLKKGD 8
            VPRV+HPDWLHKKVREK+DKFRQRKLVD F  + + +
Sbjct: 1137 VPRVVHPDWLHKKVREKEDKFRQRKLVDAFKSMNRNE 1173