BLASTX nr result

ID: Coptis21_contig00031977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031977
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326732.1| predicted protein [Populus trichocarpa] gi|2...    50   2e-06

>ref|XP_002326732.1| predicted protein [Populus trichocarpa] gi|222834054|gb|EEE72531.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 50.4 bits (119), Expect(2) = 2e-06
 Identities = 33/106 (31%), Positives = 54/106 (50%)
 Frame = +1

Query: 58  EMEEEMKQNDQLKLTNQEETTDLTEITFENRETPILEQEQLIEETKEARKDNEGESNIEG 237
           E E ++ QN   ++ N+EE  D  E+          E+ Q+ +E KE + +++ E+ I+ 
Sbjct: 18  EEESDVVQNYVREVENKEEKADGIEV----------EKPQIPKEIKEEKNESKAETAIDD 67

Query: 238 QHAEFGKVEETEKTNDGLSKKPKTIPKQKHTLTPTIPQPFSLALKK 375
                 K     + +  ++KKPK  PKQ   +  T+PQPFSLA  K
Sbjct: 68  NKQSQAKKVGVNQAD--IAKKPKQAPKQIPKMKITVPQPFSLATDK 111



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 366 TEKRMVRDRQVGSLQLTESKSKLSKSVSINLRVDT 470
           T+KRM R+R+           KLSKS S+N +V +
Sbjct: 109 TDKRMSRERRASVDFKDLQLPKLSKSASVNYKVQS 143


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