BLASTX nr result

ID: Coptis21_contig00031972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031972
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534088.1| PREDICTED: retinol dehydrogenase 11-like [Gl...   227   5e-57
ref|XP_003548306.1| PREDICTED: retinol dehydrogenase 11-like [Gl...   226   1e-56
ref|XP_003620324.1| Forever young oxidoreductase [Medicago trunc...   223   5e-56
gb|AAL60069.1|AF216836_1 forever young oxidoreductase [Solanum b...   221   2e-55
gb|ADE77731.1| unknown [Picea sitchensis]                             221   3e-55

>ref|XP_003534088.1| PREDICTED: retinol dehydrogenase 11-like [Glycine max]
          Length = 378

 Score =  227 bits (578), Expect = 5e-57
 Identities = 136/353 (38%), Positives = 198/353 (56%), Gaps = 17/353 (4%)
 Frame = +1

Query: 31   KTELMNIWELVRSW-EVFKETVFQKLITYYLPPTSSLLQFKDLSGLYVIVTGSTSGIGLH 207
            K E +   E +R W  +  E +FQ+++  +L     L    DL+    IVTGSTSGIGL 
Sbjct: 19   KKERLGWIEWLRGWFYLVYEMLFQRIMASHLHNPMPLPPVNDLT---CIVTGSTSGIGLE 75

Query: 208  TAKEFAMAGAHVVMACRNVKAAKELASKWKEEAHNGRV-LNIEVMELDLISFSSVRSFAD 384
             A++ A +GAHVVMA RN KAA+EL  KW+ ++    + LN+EVM++DL+S  SV  FA+
Sbjct: 76   IARQLAQSGAHVVMAVRNTKAAQELIQKWQVDSEGLSIPLNVEVMQVDLLSLDSVTRFAE 135

Query: 385  QWKQREVPLHILINNAGICKLEDGQKFTSGGIEQHIHVNHVATAXXXXXXXXXXXXXXXX 564
             W  R  PLH+LINNAGI  + + QKF+  G EQH+ VNH+A A                
Sbjct: 136  AWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEQHLQVNHLAPALLSILLLPSLIRGSPS 195

Query: 565  XIINVNSVGHHCGVVEPQYWNSKMEDKRFNCIRAYGSSKLAHIMFLKVLASKLLDQHKAS 744
             I+NVNS+ HH G V+ +  N     ++F+ +  Y SSKLA IMF  +L  +L  +   S
Sbjct: 196  RIVNVNSIMHHVGFVDTEDMNVTSGKRKFSSLVGYSSSKLAEIMFSSILNKRLPAESGIS 255

Query: 745  IQCIAVHPGAVCTNLNGGTNQKV--------FFMFDADQGARSTIYCATSDSVAE--NLV 894
            + C++  PG V TN+     + V        +F+F A +GARS ++ AT   V E  +++
Sbjct: 256  VLCVS--PGIVQTNVARDLPKLVQAAYHLIPYFIFSAQEGARSALFAATDPQVPEYCDML 313

Query: 895  KG-----FAYYSCSCKPGKLSPQAEDVDTCLEVWQKTMAILELKEDYLSEVLD 1038
            K       A+ S  C+P   S +A +V T  EVW+KT+ ++ L  D +  +LD
Sbjct: 314  KADEWPVCAFISQDCRPANPSEEAHNVQTSYEVWEKTLEMIGLPSDAVERLLD 366


>ref|XP_003548306.1| PREDICTED: retinol dehydrogenase 11-like [Glycine max]
          Length = 377

 Score =  226 bits (575), Expect = 1e-56
 Identities = 136/353 (38%), Positives = 196/353 (55%), Gaps = 17/353 (4%)
 Frame = +1

Query: 31   KTELMNIWELVRSW-EVFKETVFQKLITYYLPPTSSLLQFKDLSGLYVIVTGSTSGIGLH 207
            K E +   E +R W  V  E +FQ+++  +L     L    DL+    IVTGSTSGIGL 
Sbjct: 18   KKECLGWIEWLRGWFYVVYEMLFQRIMASHLHNPMPLPPVNDLT---CIVTGSTSGIGLE 74

Query: 208  TAKEFAMAGAHVVMACRNVKAAKELASKWKEEAHNGRV-LNIEVMELDLISFSSVRSFAD 384
             A++ A +GAHVVMA RN KAA+EL  KW+ ++    + LN+EVM++DL+S  SV  FA+
Sbjct: 75   IARQLAQSGAHVVMAVRNTKAAQELIQKWQVDSEGLSIPLNVEVMQVDLLSLDSVTRFAE 134

Query: 385  QWKQREVPLHILINNAGICKLEDGQKFTSGGIEQHIHVNHVATAXXXXXXXXXXXXXXXX 564
             W  R  PLH+LINNAGI  + + QKF+  G EQH+ VNH+A A                
Sbjct: 135  AWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEQHLQVNHLAPALLSILLLPSLIRGSPS 194

Query: 565  XIINVNSVGHHCGVVEPQYWNSKMEDKRFNCIRAYGSSKLAHIMFLKVLASKLLDQHKAS 744
             I+NVNS+ HH G V+ +  N     ++F+ +  Y SSKLA IMF   +  +L  +   S
Sbjct: 195  RIVNVNSIMHHVGFVDTEDMNLTSGKRKFSSMVGYSSSKLAEIMFSSTINKRLPAESGIS 254

Query: 745  IQCIAVHPGAVCTNLNGGTNQKV--------FFMFDADQGARSTIYCATSDSVAE--NLV 894
            + C++  PG V TN+     + V        +F+F A +GARS ++ AT   V E   ++
Sbjct: 255  VLCVS--PGIVQTNVARDLPKLVQAAYHLIPYFIFSAQEGARSALFAATDPQVPEYCEML 312

Query: 895  KG-----FAYYSCSCKPGKLSPQAEDVDTCLEVWQKTMAILELKEDYLSEVLD 1038
            K       A+ S  C+P   S +A +V T  EVW+KT+ ++ L  D +  +LD
Sbjct: 313  KADEWPVCAFISQDCRPANPSEEAHNVQTSYEVWEKTLEMIGLPSDAVERLLD 365


>ref|XP_003620324.1| Forever young oxidoreductase [Medicago truncatula]
            gi|355495339|gb|AES76542.1| Forever young oxidoreductase
            [Medicago truncatula]
          Length = 382

 Score =  223 bits (569), Expect = 5e-56
 Identities = 136/365 (37%), Positives = 199/365 (54%), Gaps = 19/365 (5%)
 Frame = +1

Query: 1    REREREGMDWKTELMNIWELVRSW-EVFKETVFQKLITYYLPPTSSLLQFKDLSGLYVIV 177
            ++++++ + W        E +R W  +F E +FQ++   +L     L    DL+    IV
Sbjct: 17   KKKKKQSLGWI-------EWLRGWFNLFYEFLFQRITASHLHNPMPLPPINDLT---CIV 66

Query: 178  TGSTSGIGLHTAKEFAMAGAHVVMACRNVKAAKELASKWKEEAHN---GRVLNIEVMELD 348
            TGSTSGIGL  A++ A +GAHVVMA RN K A +L  KW+ E+     G  LN+EVME+D
Sbjct: 67   TGSTSGIGLEIARQLAESGAHVVMAVRNTKRANDLIQKWQIESDGLGLGMALNVEVMEVD 126

Query: 349  LISFSSVRSFADQWKQREVPLHILINNAGICKLEDGQKFTSGGIEQHIHVNHVATAXXXX 528
            L+S  SV  FA+ W  R  PLH LINNAGI  + + QKF+  G E H+ VNH+A A    
Sbjct: 127  LLSLDSVARFAEAWNARATPLHALINNAGIFSIGEPQKFSKDGYEDHLQVNHLAPALLSI 186

Query: 529  XXXXXXXXXXXXXIINVNSVGHHCGVVEPQYWNSKMEDKRFNCIRAYGSSKLAHIMFLKV 708
                         I+NVNS+ HH G V+ +  N     ++F+ +  Y SSKLA +MF  V
Sbjct: 187  LLLPSLIRGSPSRIVNVNSIMHHVGFVDTEDMNLTSGKRKFSSLVGYSSSKLAQVMFSSV 246

Query: 709  LASKLLDQHKASIQCIAVHPGAVCTNLNGGTNQKV--------FFMFDADQGARSTIYCA 864
            L  +L    +A I  + V PG V TN+     + V        +F+F+A +G+RST++ A
Sbjct: 247  LFKRL--PAEAGISVLCVSPGIVQTNVARDLPKSVQTGYHLIPYFIFNAQEGSRSTLFAA 304

Query: 865  TSDSVAE--NLVKG-----FAYYSCSCKPGKLSPQAEDVDTCLEVWQKTMAILELKEDYL 1023
            T   V+E   L+K        Y S  C+P   S +A ++ T  EVW+KT+ ++ L  D +
Sbjct: 305  TDPQVSEYCELLKSDEWPVCPYISHDCRPANASEEAHNLQTSHEVWEKTLEMIGLPSDAV 364

Query: 1024 SEVLD 1038
             + L+
Sbjct: 365  EKFLE 369


>gb|AAL60069.1|AF216836_1 forever young oxidoreductase [Solanum bulbocastanum]
          Length = 385

 Score =  221 bits (564), Expect = 2e-55
 Identities = 133/353 (37%), Positives = 196/353 (55%), Gaps = 17/353 (4%)
 Frame = +1

Query: 31   KTELMNIWELVRSW-EVFKETVFQKLITYYLPPTSSLLQFKDLSGLYVIVTGSTSGIGLH 207
            K + +   E +R W  +  E +FQ+++  +L     L    D++    IVTGSTSGIG  
Sbjct: 25   KKKALGWMEWLRGWFYLVYEMLFQRILASHLQNPMPLPPINDVT---CIVTGSTSGIGRE 81

Query: 208  TAKEFAMAGAHVVMACRNVKAAKELASKWKEE-AHNGRVLNIEVMELDLISFSSVRSFAD 384
             A++ A AGAHVVMA R+   A+EL  KW+EE +  G  LNIEVMELDL+S  SV  FA+
Sbjct: 82   IARQLAEAGAHVVMAVRSTNRAQELIRKWQEEWSGKGLPLNIEVMELDLLSLDSVARFAE 141

Query: 385  QWKQREVPLHILINNAGICKLEDGQKFTSGGIEQHIHVNHVATAXXXXXXXXXXXXXXXX 564
             W  R  P+H+LINNAGI  + + QKF+  G E+H+ VNH+A A                
Sbjct: 142  AWNSRMAPVHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAMLSILLLPSLIRGSPS 201

Query: 565  XIINVNSVGHHCGVVEPQYWNSKMEDKRFNCIRAYGSSKLAHIMFLKVLASKLLDQHKAS 744
             IINVNS  H+ G V+P+  N     +++  +  YG SKLA IMF  VL  +L  +   S
Sbjct: 202  RIINVNSTMHYVGFVDPEDMNVVSGKRKYTSVVGYGGSKLAQIMFSSVLQKRLPAESGIS 261

Query: 745  IQCIAVHPGAVCTN--------LNGGTNQKVFFMFDADQGARSTIYCATSDSVAE--NLV 894
            + C    PG V TN        L  G     +F+F+A++G+RST++ AT   ++E   ++
Sbjct: 262  VVCNT--PGIVLTNVARDLPQFLQVGYRLIPYFIFNAEEGSRSTLFAATDPQISEYCEML 319

Query: 895  KG-----FAYYSCSCKPGKLSPQAEDVDTCLEVWQKTMAILELKEDYLSEVLD 1038
            K       AY S  C+P   S +A +++T  +VW+KT+ ++ L  D +  +++
Sbjct: 320  KADDWPVCAYISHDCRPTNASEEAHNIETSYKVWEKTLELVGLPSDAVERLIE 372


>gb|ADE77731.1| unknown [Picea sitchensis]
          Length = 370

 Score =  221 bits (563), Expect = 3e-55
 Identities = 130/357 (36%), Positives = 197/357 (55%), Gaps = 18/357 (5%)
 Frame = +1

Query: 22   MDWKTELMNIW-ELVRSWE-VFKETVFQKLITYYLPPTSSLLQFKDLSGLYVIVTGSTSG 195
            M  K ++   W E ++ W  V  + +FQ+++  +L    + LQ   L+GL  IVTG+TSG
Sbjct: 1    MGGKAQISLGWIEWIKGWLLVLYDILFQRILACHL---KNPLQLPPLNGLTCIVTGATSG 57

Query: 196  IGLHTAKEFAMAGAHVVMACRNVKAAKELASKWKEEAHN-GRVLNIEVMELDLISFSSVR 372
            IGL  AK  A  GAHVVMACR  +AA +L  KW++E      +L+IEVMELDL+S  SV 
Sbjct: 58   IGLEMAKHLAEGGAHVVMACRKTRAANDLIQKWQKECSGMAGLLDIEVMELDLLSLESVG 117

Query: 373  SFADQWKQREVPLHILINNAGICKLEDGQKFTSGGIEQHIHVNHVATAXXXXXXXXXXXX 552
             FA  W  R+ PLH+LINNAGI  +   Q F+  G E+H+ VNH+A A            
Sbjct: 118  KFASAWNARQGPLHVLINNAGIFSIGAPQTFSKDGFEEHMQVNHLAPALLTLLLLPSLIR 177

Query: 553  XXXXXIINVNSVGHHCGVVEPQYWNSKMEDKRFNCIRAYGSSKLAHIMFLKVLASKLLDQ 732
                 ++NVNS  HH G V+    N     ++++ +  Y  SKLA IMF  VL  KL  +
Sbjct: 178  GSPSRVVNVNSNMHHLGFVDSNDLNVTSGKRKYSSVIGYSGSKLAQIMFSSVLQKKLPSE 237

Query: 733  HKASIQCIAVHPGAVCTN--------LNGGTNQKVFFMFDADQGARSTIYCATSDSVAE- 885
               ++ C++  PG V TN        +  G +   +F+F A +GARST++ AT   + E 
Sbjct: 238  AGLNVMCVS--PGVVMTNVARDLPRIIQTGYHLIPYFLFSAQEGARSTLFAATDPDIPEY 295

Query: 886  -NLVKG-----FAYYSCSCKPGKLSPQAEDVDTCLEVWQKTMAILELKEDYLSEVLD 1038
             ++++        Y+S  C+P   S +A +VD+ ++VW KT+ ++ L  + +  +++
Sbjct: 296  CSVLRADDWPVCPYFSGDCRPTNASAEAHNVDSAMKVWDKTLELIGLPSNAVERLME 352


Top