BLASTX nr result

ID: Coptis21_contig00031955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031955
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi...   115   5e-24
emb|CAN63817.1| hypothetical protein VITISV_010338 [Vitis vinifera]   115   5e-24
ref|XP_003624227.1| LETM1 and EF-hand domain-containing protein ...   114   1e-23
tpg|DAA37123.1| TPA: hypothetical protein ZEAMMB73_026778 [Zea m...   113   1e-23
ref|XP_003531271.1| PREDICTED: LETM1 and EF-hand domain-containi...   113   1e-23

>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
           mitochondrial [Vitis vinifera]
           gi|296084337|emb|CBI24725.3| unnamed protein product
           [Vitis vinifera]
          Length = 764

 Score =  115 bits (287), Expect = 5e-24
 Identities = 66/107 (61%), Positives = 75/107 (70%)
 Frame = -3

Query: 322 LPVFLKLFPNMLPSTFKDTR*KHREYVXXXXXXXXXXXXXXXXXXRIEYAKFLQDTVKEM 143
           LPVFLKLFPNMLPSTF+D   K +E +                   IEYA+FLQDTVKEM
Sbjct: 287 LPVFLKLFPNMLPSTFQDKM-KEQEALKRRLNAR------------IEYARFLQDTVKEM 333

Query: 142 AKEVQN*RSGEIEKTAKVLGKFLNEIRKGAHASNGEILRFAKLFNDE 2
           AKEVQN RSGEI+KTA+ L +FLN +R+GA  SN EIL FAKLFNDE
Sbjct: 334 AKEVQNSRSGEIKKTAEDLDEFLNRVRRGAGVSNDEILAFAKLFNDE 380


>emb|CAN63817.1| hypothetical protein VITISV_010338 [Vitis vinifera]
          Length = 342

 Score =  115 bits (287), Expect = 5e-24
 Identities = 66/107 (61%), Positives = 75/107 (70%)
 Frame = -3

Query: 322 LPVFLKLFPNMLPSTFKDTR*KHREYVXXXXXXXXXXXXXXXXXXRIEYAKFLQDTVKEM 143
           LPVFLKLFPNMLPSTF+D   K +E +                   IEYA+FLQDTVKEM
Sbjct: 146 LPVFLKLFPNMLPSTFQDKM-KEQEALKRRLNAR------------IEYARFLQDTVKEM 192

Query: 142 AKEVQN*RSGEIEKTAKVLGKFLNEIRKGAHASNGEILRFAKLFNDE 2
           AKEVQN RSGEI+KTA+ L +FLN +R+GA  SN EIL FAKLFNDE
Sbjct: 193 AKEVQNSRSGEIKKTAEDLDEFLNRVRRGAGVSNDEILAFAKLFNDE 239


>ref|XP_003624227.1| LETM1 and EF-hand domain-containing protein [Medicago truncatula]
           gi|355499242|gb|AES80445.1| LETM1 and EF-hand
           domain-containing protein [Medicago truncatula]
          Length = 810

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/107 (60%), Positives = 75/107 (70%)
 Frame = -3

Query: 322 LPVFLKLFPNMLPSTFKDTR*KHREYVXXXXXXXXXXXXXXXXXXRIEYAKFLQDTVKEM 143
           LPVFLKLFPNMLPSTF+D   K +E +                   IEYAKFLQDTVKEM
Sbjct: 293 LPVFLKLFPNMLPSTFQDKM-KEQEALKRRLNAR------------IEYAKFLQDTVKEM 339

Query: 142 AKEVQN*RSGEIEKTAKVLGKFLNEIRKGAHASNGEILRFAKLFNDE 2
           AKEVQN RSGE++KTA+ L +F+N++R GA  SN EIL FAKLFNDE
Sbjct: 340 AKEVQNSRSGEMKKTAEDLDEFMNKVRTGARVSNDEILGFAKLFNDE 386


>tpg|DAA37123.1| TPA: hypothetical protein ZEAMMB73_026778 [Zea mays]
          Length = 753

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/107 (59%), Positives = 74/107 (69%)
 Frame = -3

Query: 322 LPVFLKLFPNMLPSTFKDTR*KHREYVXXXXXXXXXXXXXXXXXXRIEYAKFLQDTVKEM 143
           LPVFLKLFPNMLPSTF+D   K  E +                   +EYAKFLQDT KEM
Sbjct: 279 LPVFLKLFPNMLPSTFQDKM-KEEEALKRKLKAR------------MEYAKFLQDTAKEM 325

Query: 142 AKEVQN*RSGEIEKTAKVLGKFLNEIRKGAHASNGEILRFAKLFNDE 2
           AKEVQ  RSGE+++TA+ L +FLN++RKG HASN EIL FAKLFNDE
Sbjct: 326 AKEVQTSRSGEMKQTAEDLDEFLNKVRKGGHASNDEILSFAKLFNDE 372


>ref|XP_003531271.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
           mitochondrial-like [Glycine max]
          Length = 738

 Score =  113 bits (283), Expect = 1e-23
 Identities = 66/107 (61%), Positives = 75/107 (70%)
 Frame = -3

Query: 322 LPVFLKLFPNMLPSTFKDTR*KHREYVXXXXXXXXXXXXXXXXXXRIEYAKFLQDTVKEM 143
           LPVFLKLFPNMLPSTF+D   K +E +                   IEYA+FLQDTVKEM
Sbjct: 259 LPVFLKLFPNMLPSTFQDKM-KEQEALKRRLKAR------------IEYARFLQDTVKEM 305

Query: 142 AKEVQN*RSGEIEKTAKVLGKFLNEIRKGAHASNGEILRFAKLFNDE 2
           AKEVQN RSGE++KTA+ L +FLN IR+GA  SN EIL FAKLFNDE
Sbjct: 306 AKEVQNSRSGELKKTAEDLDEFLNTIRRGATVSNEEILGFAKLFNDE 352


Top