BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031947
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...    68   7e-10
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...    67   2e-09
gb|AFK37781.1| unknown [Lotus japonicus]                               62   4e-08
emb|CBI39148.3| unnamed protein product [Vitis vinifera]               60   2e-07
gb|ABR18787.1| class S F-box protein [Nicotiana alata]                 57   2e-06

>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
           gi|355513985|gb|AES95608.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
 Frame = -2

Query: 367 TNEYKVIRLRQ------YKGEIF-----TLGTARWRRIE-DKVPKYGRHTDVSVLFNGNL 224
           TNEYKVIR+ +      YK ++      TLGTA WR +E D +  + R    + + NG L
Sbjct: 196 TNEYKVIRMWKRCDGWCYKSDVMVVEMHTLGTATWRNVEVDPMFSFTRLGSPTCV-NGAL 254

Query: 223 HWISSEQPDEPISIVAFNVASEKFHGFESPPPVMPEYVFRKICLRVIE-EQLYFIGEKTL 47
           HWI+ +  ++  SI+ FN  SEKF  F SPP   P +  +++ + ++E +   +I E T+
Sbjct: 255 HWINYDDKNKTRSILCFNFESEKFQSFPSPP--HPHH--KRLSITMVELKGFLYICESTV 310

Query: 46  DHFDFDMWVMKDYGV 2
           +     +W+MK YG+
Sbjct: 311 N--SCVVWLMKKYGI 323


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 13/135 (9%)
 Frame = -2

Query: 367 TNEYKVIRLRQ------YKGEIF-----TLGTARWRRIE-DKVPKYGRHTDVSVLFNGNL 224
           TNEYKVIR+ +      YK ++      TLGT  WR +E D +  + R    + + NG L
Sbjct: 196 TNEYKVIRMWKRCDGWCYKSDVMVVEMHTLGTTTWRNVEVDPMFSFTRLGSPTCV-NGAL 254

Query: 223 HWISSEQPDEPISIVAFNVASEKFHGFESPPPVMPEYVFRKICLRVIE-EQLYFIGEKTL 47
           HWI+ +  ++  SI+ FN  SEKF  F SPP   P +  +++ + ++E +   +I E T+
Sbjct: 255 HWINYDDKNKTRSILCFNFESEKFQSFPSPP--HPHH--KRLSITMVELKGFLYICESTV 310

Query: 46  DHFDFDMWVMKDYGV 2
           +     +W+MK YG+
Sbjct: 311 N--SCVVWLMKKYGI 323


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
 Frame = -2

Query: 364 NEYKVIR----LRQYKG----EIFTLGTARWRRIEDKVPKYGRHTDVSVLFNGNLHWISS 209
           NEYKV+R    L+ Y G    E+ TLGT+ WR +E     Y  H       +G LHWI S
Sbjct: 236 NEYKVVRILRGLQFYHGIMAAEVHTLGTSTWRNVEVN-SMYFYHLRFPTCVSGALHWIGS 294

Query: 208 EQPDEPISIVAFNVASEKFHGFESPPPVMPEYVFRKICLRVIEEQLYFIGEKTLDHFDFD 29
                 +SI+ F+  SE+F  F + PP + +     I +  +   LY I +       F 
Sbjct: 295 YHGT--LSILCFDFESERFRSFPT-PPCLYQSCTESITMGELRGSLY-ICDSFSKGTPFV 350

Query: 28  MWVMKDYG 5
           MW+MK+YG
Sbjct: 351 MWIMKEYG 358


>emb|CBI39148.3| unnamed protein product [Vitis vinifera]
          Length = 711

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
 Frame = -2

Query: 367 TNEYKVIRLRQYKG------EIFTLGTARWRRIEDKVPKYGRHTDV-----SVLFNGNLH 221
           +++YK++R+  + G      +IFTL T +WRR+E+       H+ V     +  FNGNLH
Sbjct: 149 SDDYKIVRIFTFLGKDKTGIDIFTLKTNKWRRVEE------THSSVIGYWSATYFNGNLH 202

Query: 220 WISSEQ----PDEPISIVAFNVASEKFHGFESPPPVMPEYVFRKICLRVIEEQLYFIGEK 53
           W++        DE  S+VAF++  EKF   E P       VF    LRV+   L   G  
Sbjct: 203 WLAFRYGGYGEDERSSMVAFSLREEKFQEMELP---SQRAVFG---LRVLGGCLCVDGLY 256

Query: 52  TLDHFDFDMWVMKDYGV 2
           T      D WVM++YG+
Sbjct: 257 T-----NDKWVMEEYGI 268


>gb|ABR18787.1| class S F-box protein [Nicotiana alata]
          Length = 392

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 47/145 (32%), Positives = 63/145 (43%), Gaps = 23/145 (15%)
 Frame = -2

Query: 367 TNEYKVIRL----RQY-------------KGEIFTLGTARWRRIEDKVPKYGRHTDVSVL 239
           TN+YKV+R+     +Y             K E++ L T  WRRI+D            V 
Sbjct: 173 TNDYKVVRILRPAHEYTFEDFDNHIRDVSKVEVYNLSTNSWRRIKDLECLVDTLHCSHVF 232

Query: 238 FNGNLHWISSEQPDEPISIVAFNVASEKFHGFESPPPVMPEYVFRKICLRVIEEQLYFI- 62
           FNG  HW    + D+   IV+FN + E F    SP  +  E    +  L V+ E L  I 
Sbjct: 233 FNGAFHWRRYTKSDDYF-IVSFNFSIESFQMIPSPEGLTDE---GRKSLFVLSESLALIC 288

Query: 61  -----GEKTLDHFDFDMWVMKDYGV 2
                  + L H   D+WVMK YGV
Sbjct: 289 FTENYPREMLVHQSIDIWVMKKYGV 313