BLASTX nr result
ID: Coptis21_contig00031941
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00031941 (639 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 46 5e-08 ref|XP_002437980.1| hypothetical protein SORBIDRAFT_10g005830 [S... 48 9e-07 ref|XP_002451277.1| hypothetical protein SORBIDRAFT_05g026830 [S... 44 1e-06 ref|XP_002452122.1| hypothetical protein SORBIDRAFT_04g020080 [S... 42 2e-06 gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 57 3e-06 >emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1365 Score = 45.8 bits (107), Expect(2) = 5e-08 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Frame = -2 Query: 347 CSHGLDSQLHIFTRCEFAKVLWVGGILE----PLLAIHGDSFQSWFRQALTALFRKSTDT 180 C +++ H+F C ++ +W +L P+ I S + W + L L+++ Sbjct: 1098 CKQDKENESHLFRDCNISRHVWASSLLGIRICPMTVI---SIEDWIKNFLKLLWKEDGVK 1154 Query: 179 FFLLDHFGVTLWQIWIS*NASQFSTDKLNPLSLL 78 + F TLW IWI N F ++++NP++++ Sbjct: 1155 SPRVSEFIATLWAIWIHRNNVIFRSEEVNPVAIM 1188 Score = 37.0 bits (84), Expect(2) = 5e-08 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = -1 Query: 579 IWACHRSAEYTVKS--AYNLLWDGIFPSLKIEQPLLVKIWKSKLLFKIRFFLWQCYHGLI 406 +W+ +S VK A+ LL G + K + K W S LL K +FF W+ + + Sbjct: 1019 VWSESKSGVPRVKDIYAFYLLDKGELNTTKENRQFWNKFWASDLLPKWKFFTWRLLNKAL 1078 Query: 405 PTASFLAHRGFQVNNSCTM 349 T+S L R + C++ Sbjct: 1079 ATSSNLRKRNILIQEMCSL 1097 >ref|XP_002437980.1| hypothetical protein SORBIDRAFT_10g005830 [Sorghum bicolor] gi|241916203|gb|EER89347.1| hypothetical protein SORBIDRAFT_10g005830 [Sorghum bicolor] Length = 263 Score = 47.8 bits (112), Expect(2) = 9e-07 Identities = 30/81 (37%), Positives = 42/81 (51%) Frame = -1 Query: 585 QLIWACHRSAEYTVKSAYNLLWDGIFPSLKIEQPLLVKIWKSKLLFKIRFFLWQCYHGLI 406 Q+ W S +YT KSAYN+ + G S+ P LV WK+ K +FFLW I Sbjct: 69 QIHWKLESSGKYTAKSAYNIQFSG---SILSNSPKLV--WKAWAPPKCKFFLWLLLQDRI 123 Query: 405 PTASFLAHRGFQVNNSCTMVL 343 TA+ L RG++ N C + + Sbjct: 124 WTAARLQVRGWENNYFCGLCI 144 Score = 30.8 bits (68), Expect(2) = 9e-07 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Frame = -2 Query: 347 CSHGLDSQLHIFTRCEFAKVLWVG-------GILEPLLAIHGDSFQSWFRQALTALFRKS 189 C L + +H+F C F+ +W G L+P+ + WF + + K+ Sbjct: 143 CIRNLKTAMHLFVECPFSCCVWEQVADWSNCGNLQPVQWGTTADVEEWFLKMIEQ-GNKT 201 Query: 188 TDTFFLLDHFGVTLWQIWIS*NASQFSTDKLNPLSLLYSVR 66 T +L T W IW NA+ F + P + ++ Sbjct: 202 AHTLAIL-----TAWCIWNQRNAAIFRNEISTPAQVCSRIK 237 >ref|XP_002451277.1| hypothetical protein SORBIDRAFT_05g026830 [Sorghum bicolor] gi|241937120|gb|EES10265.1| hypothetical protein SORBIDRAFT_05g026830 [Sorghum bicolor] Length = 455 Score = 43.5 bits (101), Expect(2) = 1e-06 Identities = 27/78 (34%), Positives = 39/78 (50%) Frame = -1 Query: 582 LIWACHRSAEYTVKSAYNLLWDGIFPSLKIEQPLLVKIWKSKLLFKIRFFLWQCYHGLIP 403 +IW S EY+ KSAY + + G L+ P+L IWK+ K FFLW + Sbjct: 263 IIWTLESSGEYSAKSAYTIQFAG---HLQSAHPVL--IWKAWAPPKCNFFLWLLLQDRLW 317 Query: 402 TASFLAHRGFQVNNSCTM 349 TA+ L R ++ N C + Sbjct: 318 TAARLLRRQWENNYFCAL 335 Score = 34.3 bits (77), Expect(2) = 1e-06 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Frame = -2 Query: 347 CSHGLDSQLHIFTRCEFAKVLW-------VGGILEPLLAIHGDSFQSWFRQALTALFRKS 189 C L++ H+F C +++++W L P + WF Q L + +KS Sbjct: 336 CERNLETAHHLFFECPYSRLVWQLVASWSSCSSLHPANWEVKHELEDWFSQMLASGGKKS 395 Query: 188 TDTFFLLDHFGVTLWQIWIS*NASQFSTDKLNPLSLLYSVR 66 L TLW IW NA F + +LL ++ Sbjct: 396 HTLAIL------TLWSIWNRRNAVIFRQEWRTAHALLIEIK 430 >ref|XP_002452122.1| hypothetical protein SORBIDRAFT_04g020080 [Sorghum bicolor] gi|241931953|gb|EES05098.1| hypothetical protein SORBIDRAFT_04g020080 [Sorghum bicolor] Length = 377 Score = 42.0 bits (97), Expect(2) = 2e-06 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = -1 Query: 582 LIWACHRSAEYTVKSAYNLLWDGIFPSLKIEQPLLVKIWKSKLLFKIRFFLWQCYHGLIP 403 +IW S EY+ KSAY + + G ++ LV IWK+ K + FLW+ + Sbjct: 185 IIWTIESSGEYSAKSAYTIQFAG-----HLQSAHLVLIWKAWAPPKCKSFLWRLLQDRLW 239 Query: 402 TASFLAHRGFQVNNSCTM 349 T + L R ++ N C + Sbjct: 240 TVARLLRRQWENNYFCAL 257 Score = 35.4 bits (80), Expect(2) = 2e-06 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 14/124 (11%) Frame = -2 Query: 347 CSHGLDSQLHIFTRCEFAKVLW-------VGGILEPLLAIHGDSFQSWFRQALTALFRKS 189 C L++ H+F C +++++W L P + WF Q L + +KS Sbjct: 258 CERNLETAHHLFFECPYSRLVWQLVASWSSCSSLHPANWEVKHELEDWFSQMLASGGKKS 317 Query: 188 TDTFFLLDHFGVTLWQIWIS*NASQFSTDKLNPLSLLYSVRHLI-------ANIISSEFG 30 L TLW IW NA F + +LL ++ +++ S F Sbjct: 318 HTLAIL------TLWSIWNRRNAVVFRQEWRTARALLIEIKDTAHQWSLAGGSVLQSLFV 371 Query: 29 KHIL 18 HI+ Sbjct: 372 VHII 375 >gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1715 Score = 57.0 bits (136), Expect = 3e-06 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 12/128 (9%) Frame = -1 Query: 627 ADPFYFSRVYSSR*QLIWACHRSAEYTVKSAY------NLLWDGIFPSLKIEQPLLVKIW 466 A Y S Y++R WA R+ +YTV+S Y NL + I L+ + PL +IW Sbjct: 1331 AKSLYLSN-YAARDSYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINPLEGDVPLKQEIW 1389 Query: 465 KSKLLFKIRFFLWQCYHGLIPTASFLAHRGFQVNNSCTM------VLSWVGFSTSYFYAV 304 + K+ KI+ F+W+C G + T + L +R + +C ++ + F+ SY V Sbjct: 1390 RLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVV 1449 Query: 303 *ICKSFMG 280 +F G Sbjct: 1450 WRSANFSG 1457