BLASTX nr result

ID: Coptis21_contig00031920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031920
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38228.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...   103   2e-20
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]   103   2e-20
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...    96   2e-18
ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...    93   2e-17

>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   LVASNQVGCLIGKGGKIVSEMRKITATGMWILQDDRVPKCATENESVFQITGNTENVQNA 181
           +V SNQVGCL+GKGG I+SEMRK +  G+ I+  D+VPKCA+EN+ V QI+G   NVQ+ 
Sbjct: 332 VVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDG 391

Query: 182 LFIVTARLRDNLFPNNVMNMAG 247
           L+ +T RLRDNLFP+  +N AG
Sbjct: 392 LYHITGRLRDNLFPSKTLNGAG 413


>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   LVASNQVGCLIGKGGKIVSEMRKITATGMWILQDDRVPKCATENESVFQITGNTENVQNA 181
           +V SNQVGCL+GKGG I+SEMRK +  G+ I+  D+VPKCA+EN+ V QI+G   NVQ+ 
Sbjct: 395 VVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDG 454

Query: 182 LFIVTARLRDNLFPNNVMNMAG 247
           L+ +T RLRDNLFP+  +N AG
Sbjct: 455 LYHITGRLRDNLFPSKTLNGAG 476



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/70 (35%), Positives = 46/70 (65%)
 Frame = +2

Query: 2   LVASNQVGCLIGKGGKIVSEMRKITATGMWILQDDRVPKCATENESVFQITGNTENVQNA 181
           L  ++QVG +IGKGGK+V ++R+ + + + +L  +++P CA   + + +I G+   V+ A
Sbjct: 156 LAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKA 215

Query: 182 LFIVTARLRD 211
           L  V+ RL+D
Sbjct: 216 LVAVSRRLQD 225


>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
          Length = 569

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   LVASNQVGCLIGKGGKIVSEMRKITATGMWILQDDRVPKCATENESVFQITGNTENVQNA 181
           +V SNQVGCL+GKGG I+SEMRK +  G+ I+  D+VPKCA+EN+ V QI+G   NVQ+ 
Sbjct: 316 VVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDG 375

Query: 182 LFIVTARLRDNLFPNNVMNMAG 247
           L+ +T RLRDNLFP+  +N AG
Sbjct: 376 LYHITGRLRDNLFPSKTLNGAG 397


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 658

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = +2

Query: 2   LVASNQVGCLIGKGGKIVSEMRKITATGMWILQDDRVPKCATENESVFQITGNTENVQNA 181
           +V SNQVGC++GKGG I+SE+RK+T T + I+  D+VP CA E++ + QI+G   NVQ+A
Sbjct: 400 VVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDA 459

Query: 182 LFIVTARLRDNLFPNNVMNMAGRVG 256
           L+ VT RLRDNLF + + N   R G
Sbjct: 460 LYNVTGRLRDNLFSSVLSNSGTRNG 484


>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/73 (57%), Positives = 57/73 (78%)
 Frame = +2

Query: 2   LVASNQVGCLIGKGGKIVSEMRKITATGMWILQDDRVPKCATENESVFQITGNTENVQNA 181
           +V SNQVGC++GKGG I+SE+RK+T T + I+  D+VP CA E++ + QI+G   NVQ+A
Sbjct: 405 VVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDA 464

Query: 182 LFIVTARLRDNLF 220
           L+ VT RLRDNLF
Sbjct: 465 LYNVTGRLRDNLF 477


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