BLASTX nr result

ID: Coptis21_contig00031900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031900
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283815.1| PREDICTED: uncharacterized protein LOC100266...    90   5e-26
ref|XP_002283976.1| PREDICTED: uncharacterized protein LOC100248...    89   3e-25
emb|CAN64915.1| hypothetical protein VITISV_030073 [Vitis vinifera]    89   3e-25
ref|XP_002514237.1| conserved hypothetical protein [Ricinus comm...    82   3e-22
ref|XP_003546548.1| PREDICTED: uncharacterized protein LOC100786...    83   5e-21

>ref|XP_002283815.1| PREDICTED: uncharacterized protein LOC100266427 [Vitis vinifera]
          Length = 201

 Score = 90.1 bits (222), Expect(2) = 5e-26
 Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = +3

Query: 252 VDNEATESSPV-LPGSGRSPFVRQLRITDSPFPLRDVDENSQVDKEAEEFIERFYEQLRL 428
           ++NE  E+SP+ LPG GRSP VRQLR+TDSPFP++D DE+ QVDK AEEFI +F++ L+L
Sbjct: 125 LNNEMVEASPLTLPGFGRSPMVRQLRVTDSPFPIKDTDEDPQVDKAAEEFIRKFHKDLKL 184

Query: 429 QKNMSTREA 455
           QK MS  E+
Sbjct: 185 QKMMSALES 193



 Score = 52.8 bits (125), Expect(2) = 5e-26
 Identities = 35/84 (41%), Positives = 44/84 (52%)
 Frame = +1

Query: 4   KVIENLMXXXXXXXXCRSSNDVHMSFIAPKDYEFSCSNSXXXXXXXXXXXXXXXXXTSPL 183
           K + NLM        CRS ND  +SF++PK+YEFSCSNS                     
Sbjct: 50  KALGNLMFHHHSSLSCRS-NDA-LSFVSPKEYEFSCSNS------PAYPFHYPFQLNKRK 101

Query: 184 RSTNAVIKDDVTTVSAVQKILEML 255
           R  ++   DDVTTV AVQ++LEML
Sbjct: 102 RHHHSTRYDDVTTVCAVQRVLEML 125


>ref|XP_002283976.1| PREDICTED: uncharacterized protein LOC100248099 [Vitis vinifera]
          Length = 208

 Score = 89.0 bits (219), Expect(2) = 3e-25
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 273 SSPVLPGSGRSPFVRQLRITDSPFPLRDVDENSQVDKEAEEFIERFYEQLRLQK 434
           +SP LPG GRSP VRQLRITDSPFPL+D+DE+S+VDK AEEFIERFY  L+ QK
Sbjct: 148 ASPALPGFGRSPMVRQLRITDSPFPLKDIDEDSEVDKAAEEFIERFYNDLKKQK 201



 Score = 51.2 bits (121), Expect(2) = 3e-25
 Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +1

Query: 4   KVIENLMXXXXXXXXCRSSNDVHMSFIAPKDYEFSCSNSXXXXXXXXXXXXXXXXXTSPL 183
           K I NLM         R S D H+SF AP++YEFSCSNS                    +
Sbjct: 56  KAIGNLMFHHHSSSAARRSADGHISFAAPREYEFSCSNSPAYPYHFPFNFNKRKHNHHNI 115

Query: 184 RS----TNAVIKDDVTTVSAVQKILEML 255
            S    T     DD TTV+AV+ +LEML
Sbjct: 116 FSCVFQTPPTSDDDFTTVNAVKAVLEML 143


>emb|CAN64915.1| hypothetical protein VITISV_030073 [Vitis vinifera]
          Length = 208

 Score = 89.0 bits (219), Expect(2) = 3e-25
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 273 SSPVLPGSGRSPFVRQLRITDSPFPLRDVDENSQVDKEAEEFIERFYEQLRLQK 434
           +SP LPG GRSP VRQLRITDSPFPL+D+DE+S+VDK AEEFIERFY  L+ QK
Sbjct: 148 ASPALPGFGRSPMVRQLRITDSPFPLKDIDEDSEVDKAAEEFIERFYNDLKKQK 201



 Score = 51.2 bits (121), Expect(2) = 3e-25
 Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +1

Query: 4   KVIENLMXXXXXXXXCRSSNDVHMSFIAPKDYEFSCSNSXXXXXXXXXXXXXXXXXTSPL 183
           K I NLM         R S D H+SF AP++YEFSCSNS                    +
Sbjct: 56  KAIGNLMFHHHSSSAARRSADGHISFAAPREYEFSCSNSPAYPYHFPFNFNKRKHNHHNI 115

Query: 184 RS----TNAVIKDDVTTVSAVQKILEML 255
            S    T     DD TTV+AV+ +LEML
Sbjct: 116 FSCVFQTPPTSDDDFTTVNAVKAVLEML 143


>ref|XP_002514237.1| conserved hypothetical protein [Ricinus communis]
           gi|223546693|gb|EEF48191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score = 82.0 bits (201), Expect(2) = 3e-22
 Identities = 44/73 (60%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
 Frame = +3

Query: 252 VDNEA-TESSP-VLPGSGRSPFVRQLRITDSPFPLRDVDENSQVDKEAEEFIERFYEQLR 425
           ++NE   E+SP VLPG G+SP VRQLRITDSPFPL+D + +SQVDK AEEFI++FY+ L+
Sbjct: 130 LNNEVQVEASPMVLPGFGKSPMVRQLRITDSPFPLKD-EGDSQVDKAAEEFIKKFYKDLK 188

Query: 426 LQKNMSTREARSH 464
           LQK ++  E+  H
Sbjct: 189 LQKTVAALESPYH 201



 Score = 48.1 bits (113), Expect(2) = 3e-22
 Identities = 33/84 (39%), Positives = 43/84 (51%)
 Frame = +1

Query: 4   KVIENLMXXXXXXXXCRSSNDVHMSFIAPKDYEFSCSNSXXXXXXXXXXXXXXXXXTSPL 183
           K I NL+           SND  ++FI+P++YEFSCSNS                    L
Sbjct: 51  KAIGNLVYHHNHSSFSCRSNDA-LNFISPREYEFSCSNSPATFYPFSAHKRKHHHH---L 106

Query: 184 RSTNAVIKDDVTTVSAVQKILEML 255
             T +   +DVTTV+AVQK+LEML
Sbjct: 107 HFTKSYKYNDVTTVAAVQKMLEML 130


>ref|XP_003546548.1| PREDICTED: uncharacterized protein LOC100786928 [Glycine max]
          Length = 203

 Score = 83.2 bits (204), Expect(2) = 5e-21
 Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
 Frame = +3

Query: 237 ENIGNVDNEAT--ESSPVLPGSGRSPFVRQLRITDSPFPLRDVDENSQ--VDKEAEEFIE 404
           E + N +N+A   E+SP LPG GRSP VRQLR+TDSPFPLRD D+++   VDK AE+FI+
Sbjct: 134 EMLNNNNNDAVKVEASPALPGFGRSPMVRQLRVTDSPFPLRDADQDNDHLVDKAAEDFIK 193

Query: 405 RFYEQLRLQ 431
           RFY++LR Q
Sbjct: 194 RFYKELRKQ 202



 Score = 43.1 bits (100), Expect(2) = 5e-21
 Identities = 27/84 (32%), Positives = 39/84 (46%)
 Frame = +1

Query: 4   KVIENLMXXXXXXXXCRSSNDVHMSFIAPKDYEFSCSNSXXXXXXXXXXXXXXXXXTSPL 183
           K I NLM          S N  H+ F AP++YEFSCSN+                  + +
Sbjct: 54  KAIANLMSSHHHHNRGGSHNSHHLKFSAPREYEFSCSNTPHNFFFPTGGKHHRHHFFACV 113

Query: 184 RSTNAVIKDDVTTVSAVQKILEML 255
            +      DDV TV+A++ ++EML
Sbjct: 114 HAP-PTQDDDVVTVNAMKAVMEML 136


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