BLASTX nr result

ID: Coptis21_contig00031894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031894
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata] g...   117   1e-24
ref|XP_004155678.1| PREDICTED: leucine--tRNA ligase-like [Cucumi...   115   4e-24
ref|XP_004134980.1| PREDICTED: leucine--tRNA ligase-like [Cucumi...   115   4e-24
ref|NP_192344.1| leucyl-tRNA synthetase [Arabidopsis thaliana] g...   114   8e-24
ref|XP_002264138.1| PREDICTED: leucyl-tRNA synthetase [Vitis vin...   114   1e-23

>ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata]
           gi|297318527|gb|EFH48949.1| EMB2369 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 972

 Score =  117 bits (292), Expect = 1e-24
 Identities = 47/64 (73%), Positives = 59/64 (92%)
 Frame = +2

Query: 128 TKTYTITNEVRRPYPFHQIEPRWQRYWEENTTFKTPDEVDTSRPKYYILDMFPYPSGAGL 307
           ++T T T E++R YPFH+IEP+WQRYWE+N TF+TPD+VDTS+PK+Y+LDMFPYPSGAGL
Sbjct: 71  SETATTTIELKRVYPFHEIEPKWQRYWEDNRTFRTPDDVDTSKPKFYVLDMFPYPSGAGL 130

Query: 308 HVGH 319
           HVGH
Sbjct: 131 HVGH 134


>ref|XP_004155678.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus]
          Length = 1059

 Score =  115 bits (288), Expect = 4e-24
 Identities = 46/56 (82%), Positives = 54/56 (96%)
 Frame = +2

Query: 152 EVRRPYPFHQIEPRWQRYWEENTTFKTPDEVDTSRPKYYILDMFPYPSGAGLHVGH 319
           EVRR YPFH+IEP+WQRYW+EN TF+TPDEVDTS+PK+Y+LDMFPYPSG+GLHVGH
Sbjct: 167 EVRRAYPFHEIEPKWQRYWDENRTFRTPDEVDTSKPKFYVLDMFPYPSGSGLHVGH 222


>ref|XP_004134980.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus]
          Length = 978

 Score =  115 bits (288), Expect = 4e-24
 Identities = 46/56 (82%), Positives = 54/56 (96%)
 Frame = +2

Query: 152 EVRRPYPFHQIEPRWQRYWEENTTFKTPDEVDTSRPKYYILDMFPYPSGAGLHVGH 319
           EVRR YPFH+IEP+WQRYW+EN TF+TPDEVDTS+PK+Y+LDMFPYPSG+GLHVGH
Sbjct: 86  EVRRAYPFHEIEPKWQRYWDENRTFRTPDEVDTSKPKFYVLDMFPYPSGSGLHVGH 141


>ref|NP_192344.1| leucyl-tRNA synthetase [Arabidopsis thaliana]
           gi|4982478|gb|AAD36946.1|AF069441_6 putative leucyl tRNA
           synthetase [Arabidopsis thaliana]
           gi|7267192|emb|CAB77903.1| putative leucyl tRNA
           synthetase [Arabidopsis thaliana]
           gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7
           [Arabidopsis thaliana] gi|25090241|gb|AAN72260.1|
           At4g04350/T19B17_7 [Arabidopsis thaliana]
           gi|332656983|gb|AEE82383.1| leucyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 973

 Score =  114 bits (285), Expect = 8e-24
 Identities = 48/73 (65%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
 Frame = +2

Query: 107 HFSKRRG--TKTYTITNEVRRPYPFHQIEPRWQRYWEENTTFKTPDEVDTSRPKYYILDM 280
           H SK+    ++T T + E++R YPFH+IEP+WQRYWE+N  F+TPD+VDTS+PK+Y+LDM
Sbjct: 63  HGSKKEALVSETATTSIELKRVYPFHEIEPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDM 122

Query: 281 FPYPSGAGLHVGH 319
           FPYPSGAGLHVGH
Sbjct: 123 FPYPSGAGLHVGH 135


>ref|XP_002264138.1| PREDICTED: leucyl-tRNA synthetase [Vitis vinifera]
           gi|302144097|emb|CBI23202.3| unnamed protein product
           [Vitis vinifera]
          Length = 971

 Score =  114 bits (284), Expect = 1e-23
 Identities = 45/55 (81%), Positives = 53/55 (96%)
 Frame = +2

Query: 155 VRRPYPFHQIEPRWQRYWEENTTFKTPDEVDTSRPKYYILDMFPYPSGAGLHVGH 319
           +RR YPFH+IEPRWQR+WEEN TF+TPD+VDTS+PK+Y+LDMFPYPSGAGLHVGH
Sbjct: 79  IRRAYPFHEIEPRWQRFWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGH 133


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