BLASTX nr result

ID: Coptis21_contig00031879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031879
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317125.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002331541.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002302871.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002269660.1| PREDICTED: mitogen-activated protein kinase ...   134   6e-30
emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]   134   6e-30

>ref|XP_002317125.1| predicted protein [Populus trichocarpa] gi|222860190|gb|EEE97737.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/109 (66%), Positives = 88/109 (80%)
 Frame = -3

Query: 328 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 149
           MDWTRG +IGHG+SATVS+ KA+RS +VFAVKS EL KS+ LQREQ ILS+++CPQIV Y
Sbjct: 1   MDWTRGRTIGHGSSATVSMAKANRSGQVFAVKSAELLKSESLQREQSILSTLKCPQIVVY 60

Query: 148 MGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDI 2
            GCD+TNE+G   YNLF+EY+SGG L D+I+  GGCLDE  IR + R I
Sbjct: 61  KGCDITNENGKLFYNLFLEYISGGTLIDAIREGGGCLDEAMIRLYARTI 109


>ref|XP_002331541.1| predicted protein [Populus trichocarpa] gi|222873765|gb|EEF10896.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/109 (63%), Positives = 88/109 (80%)
 Frame = -3

Query: 328 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 149
           MDWTRG +IG G+SATVS+ +A++S +VFAVKS ELSKS+ LQ+EQ +LS++RCPQIV Y
Sbjct: 1   MDWTRGQTIGRGSSATVSMARANQSGKVFAVKSAELSKSESLQKEQIVLSTLRCPQIVAY 60

Query: 148 MGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDI 2
            GCD+TNE+G  +YNLF+EY SGG L D+I+  GGCLDE  IR + R I
Sbjct: 61  KGCDITNENGKVLYNLFLEYASGGTLIDAIREGGGCLDEDMIRLYARTI 109


>ref|XP_002302871.1| predicted protein [Populus trichocarpa] gi|222844597|gb|EEE82144.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/109 (59%), Positives = 84/109 (77%)
 Frame = -3

Query: 328 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 149
           MDWTRGHSIGHG++ATVS+  + +S +VFAVKSVEL +S FLQREQ+ILSS+  P IV Y
Sbjct: 2   MDWTRGHSIGHGSTATVSLATSIQSGDVFAVKSVELFQSGFLQREQQILSSLTSPFIVSY 61

Query: 148 MGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDI 2
            GCD+T E+   MYNLF+EY+  G LS++I + GG LDE  IR++T  +
Sbjct: 62  RGCDITRENSKVMYNLFLEYMPNGTLSNAIHAHGGRLDEPLIRNYTSQV 110


>ref|XP_002269660.1| PREDICTED: mitogen-activated protein kinase kinase kinase A [Vitis
           vinifera] gi|297739169|emb|CBI28820.3| unnamed protein
           product [Vitis vinifera]
          Length = 420

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/109 (60%), Positives = 83/109 (76%)
 Frame = -3

Query: 328 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 149
           MDWTRGH++G G+SATVS+  + RS +VFAVKSVELS+S+ LQRE+RILSS+R P IVGY
Sbjct: 1   MDWTRGHTLGSGSSATVSLANSLRSGDVFAVKSVELSRSESLQREERILSSLRSPYIVGY 60

Query: 148 MGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDI 2
            GCD+T E+   MYNLF+EY+ GG L D+I+  GG L E  I  + R I
Sbjct: 61  KGCDITRENKKLMYNLFIEYMPGGTLGDAIRRGGGQLHESMIGIYARQI 109


>emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]
          Length = 420

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/109 (60%), Positives = 83/109 (76%)
 Frame = -3

Query: 328 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 149
           MDWTRGH++G G+SATVS+  + RS +VFAVKSVELS+S+ LQRE+RILSS+R P IVGY
Sbjct: 1   MDWTRGHTLGSGSSATVSLANSLRSGDVFAVKSVELSRSESLQREERILSSLRSPYIVGY 60

Query: 148 MGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDI 2
            GCD+T E+   MYNLF+EY+ GG L D+I+  GG L E  I  + R I
Sbjct: 61  KGCDITRENKKLMYNLFIEYMPGGTLGDAIRRGGGQLHESMIGIYARQI 109


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