BLASTX nr result

ID: Coptis21_contig00031878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031878
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37381.3| unnamed protein product [Vitis vinifera]              164   7e-39
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   164   7e-39
ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   159   3e-37
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   158   4e-37
ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|2...   157   7e-37

>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/96 (81%), Positives = 89/96 (92%)
 Frame = -2

Query: 289 DYQEIKIQESTQVLSVGSIPRSMPVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRC 110
           DYQEIKIQES QVL VG+IPRS+PVIL+DDLVDIVKAGD +IVTGILTAKWSSDLKDVRC
Sbjct: 198 DYQEIKIQESVQVLGVGAIPRSIPVILQDDLVDIVKAGDDIIVTGILTAKWSSDLKDVRC 257

Query: 109 DLDPTLVANYVRRTNELKSEIDIPDDLENKFKDFWS 2
           DLDP L+AN+VRRTNEL+S++DIPD++  KFK FWS
Sbjct: 258 DLDPVLIANHVRRTNELRSDMDIPDEVIMKFKQFWS 293


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/96 (81%), Positives = 89/96 (92%)
 Frame = -2

Query: 289 DYQEIKIQESTQVLSVGSIPRSMPVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRC 110
           DYQEIKIQES QVL VG+IPRS+PVIL+DDLVDIVKAGD +IVTGILTAKWSSDLKDVRC
Sbjct: 198 DYQEIKIQESVQVLGVGAIPRSIPVILQDDLVDIVKAGDDIIVTGILTAKWSSDLKDVRC 257

Query: 109 DLDPTLVANYVRRTNELKSEIDIPDDLENKFKDFWS 2
           DLDP L+AN+VRRTNEL+S++DIPD++  KFK FWS
Sbjct: 258 DLDPVLIANHVRRTNELRSDMDIPDEVIMKFKQFWS 293


>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/96 (82%), Positives = 86/96 (89%)
 Frame = -2

Query: 289 DYQEIKIQESTQVLSVGSIPRSMPVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRC 110
           DYQEIKIQESTQVL VG IPRS+PVIL DDLVDIVKAGD VIVTGILTAKWS DLKDVRC
Sbjct: 204 DYQEIKIQESTQVLGVGVIPRSIPVILTDDLVDIVKAGDDVIVTGILTAKWSPDLKDVRC 263

Query: 109 DLDPTLVANYVRRTNELKSEIDIPDDLENKFKDFWS 2
           +LDP LVAN+VRR+NELKS+IDIP D+  KF+ FWS
Sbjct: 264 NLDPVLVANHVRRSNELKSDIDIPRDVIMKFEQFWS 299


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/96 (78%), Positives = 87/96 (90%)
 Frame = -2

Query: 289 DYQEIKIQESTQVLSVGSIPRSMPVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRC 110
           DYQEIKIQESTQVL VGSIPRS+ +ILKDDLVD+VKAGD VIV+G+L+AKWS DLKDVRC
Sbjct: 206 DYQEIKIQESTQVLGVGSIPRSVLIILKDDLVDLVKAGDDVIVSGVLSAKWSPDLKDVRC 265

Query: 109 DLDPTLVANYVRRTNELKSEIDIPDDLENKFKDFWS 2
           DLDP L+AN+VRRTNELK+E+DIPDD+  +F  FWS
Sbjct: 266 DLDPMLIANHVRRTNELKAEVDIPDDIIMQFTQFWS 301


>ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|222862634|gb|EEF00141.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  157 bits (398), Expect = 7e-37
 Identities = 77/96 (80%), Positives = 85/96 (88%)
 Frame = -2

Query: 289 DYQEIKIQESTQVLSVGSIPRSMPVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRC 110
           DYQEIKIQESTQVL VG IPRS+PVIL DDLVDIVK GD +IVTGILTAKWS DLKDVR 
Sbjct: 208 DYQEIKIQESTQVLGVGVIPRSIPVILMDDLVDIVKTGDDIIVTGILTAKWSPDLKDVRS 267

Query: 109 DLDPTLVANYVRRTNELKSEIDIPDDLENKFKDFWS 2
           +LDP L+ANYVRRTNELK++IDIP+D+  KFK FWS
Sbjct: 268 NLDPVLIANYVRRTNELKADIDIPNDVIMKFKQFWS 303


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