BLASTX nr result

ID: Coptis21_contig00031873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031873
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member...   300   4e-79
ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member...   283   3e-74
ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago trunc...   276   3e-72
dbj|BAA97455.1| unnamed protein product [Arabidopsis thaliana]        259   6e-67
ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arab...   257   3e-66

>ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
           gi|296088768|emb|CBI38218.3| unnamed protein product
           [Vitis vinifera]
          Length = 1175

 Score =  300 bits (767), Expect = 4e-79
 Identities = 160/311 (51%), Positives = 199/311 (63%), Gaps = 21/311 (6%)
 Frame = +2

Query: 2   KTASLNPNNISVIHASAGAQICRQFRHHDIXXXXXXXXXXXYNSYRESHSNPYLKGDEFF 181
           + A  NPN I+VI AS  AQ+  Q                   S   SH  P   GD  F
Sbjct: 27  RVALKNPNKIAVIQASPTAQLHNQ-------------------SLASSHIPPPYHGDRSF 67

Query: 182 TYSDVLSSVQSLSYRIRHVIDNPDDPYLVRPPQDCIVND------------------ECV 307
           T+S +  ++ SLS+R+R ++    DP+L+ P  + +  +                  E  
Sbjct: 68  TFSHLFDAIDSLSFRLRSILAGAQDPFLINPTGNYLCRNQLEHAPFSLSSTSYKPIAEQS 127

Query: 308 EEIGG---PRIIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALI 478
           EEI     P+I+GIYMVPSVEYI+A+LSVLRCGEAF+PLDPSWPK+RILSI+SSS V LI
Sbjct: 128 EEIKNKEIPKILGIYMVPSVEYIIAVLSVLRCGEAFMPLDPSWPKERILSIVSSSNVDLI 187

Query: 479 VKSKSCFTATEDFQLEESDWLAEQSSCPVLEMSMNENREKVFGCSELVWPCQSMRKRKFC 658
           +  +S F  +  F+L++S WL + +SCPVL MSM +  +     SELVWPC+    R FC
Sbjct: 188 IGCRSSFDTSSHFKLDKSHWLVDCNSCPVLSMSMEDKLQNHSDPSELVWPCEKEELRLFC 247

Query: 659 YLMYTSGSTGKPKGVCGTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGI 838
           YLMYTSGSTGKPKG+CGTE GLLNR+LWMQE +PL  EEILLFKTSISF+DHLQEFL  I
Sbjct: 248 YLMYTSGSTGKPKGICGTEKGLLNRFLWMQEFYPLLGEEILLFKTSISFVDHLQEFLGAI 307

Query: 839 LSSVPLVIPPF 871
           LS+  LVIPPF
Sbjct: 308 LSACTLVIPPF 318


>ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member 4-like [Glycine max]
          Length = 1153

 Score =  283 bits (725), Expect = 3e-74
 Identities = 150/291 (51%), Positives = 195/291 (67%), Gaps = 1/291 (0%)
 Frame = +2

Query: 2   KTASLNPNNISVIHASAGAQICRQF-RHHDIXXXXXXXXXXXYNSYRESHSNPYLKGDEF 178
           +TAS NPN I+ IHAS  A + RQF R +                  ES S P   GD  
Sbjct: 21  RTASANPNKIAAIHASGVAHLSRQFHRENSTAPNFDGDLATLLEKRVESTSPPLYHGDRS 80

Query: 179 FTYSDVLSSVQSLSYRIRHVIDNPDDPYLVRPPQDCIVNDECVEEIGGPRIIGIYMVPSV 358
           FTYS V ++V+SLS+R+R +++              ++N+   E    P+I+GIYM PSV
Sbjct: 81  FTYSRVSNAVRSLSFRLRSILEG-------------VMNESSREY--RPKIVGIYMPPSV 125

Query: 359 EYIVALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALIVKSKSCFTATEDFQLEESDW 538
           EY+VA+LSVLRCGEAFLPLDP WP +RILS+  SS V LI+ S+S F  +   +L+ES W
Sbjct: 126 EYVVAVLSVLRCGEAFLPLDPIWPNERILSVAYSSNVDLIIGSQSSFGKSNLDKLDESHW 185

Query: 539 LAEQSSCPVLEMSMNENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPKGVCGTEI 718
           L +  SCPVL  S++EN +   G ++L WPC + ++R F YLMYTSGSTGKPKGVCGTE 
Sbjct: 186 LVKSISCPVLNYSIDENIQVCSGPTDLTWPCANEKRRSFSYLMYTSGSTGKPKGVCGTEQ 245

Query: 719 GLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPF 871
           GL NR+LWMQ ++PL+ +E+LLF +S+SFIDHLQEFLS IL++  LVIPPF
Sbjct: 246 GLSNRFLWMQGMYPLNGQELLLFNSSVSFIDHLQEFLSAILTACVLVIPPF 296


>ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago truncatula]
           gi|355521679|gb|AET02133.1| Acetyl-coenzyme A synthetase
           [Medicago truncatula]
          Length = 1224

 Score =  276 bits (707), Expect = 3e-72
 Identities = 151/316 (47%), Positives = 199/316 (62%), Gaps = 26/316 (8%)
 Frame = +2

Query: 2   KTASLNPNNISVIHASAGAQICRQFRHHDIXXXXXXXXXXXYNSYRESHSNPYLKGDEFF 181
           +TA+ NPN I+VIHAS  A + RQ   +                  +S S P+  GD  F
Sbjct: 16  QTATANPNKIAVIHASGVANLSRQ---NSTSPNFNQDFTTLLQQRVDSTSPPFYHGDRSF 72

Query: 182 TYSDVLSSVQSLSYRIRHVIDNPDDPYL--------------------------VRPPQD 283
           TYS +L S++SLS R+  ++    DP+L                          V+P  +
Sbjct: 73  TYSQLLDSIRSLSSRLSSILHGAHDPHLITAKSQGNDGVHREEGTVQKSESLKNVKPRAE 132

Query: 284 CIVNDECVEEIGGPRIIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRILSIISSS 463
             VN   +EE   P+I+GIYM PSVEYI+A+LSVLRCGEAFLPLDP WP +RILS+ SSS
Sbjct: 133 SNVNS--IEEYK-PKIVGIYMPPSVEYIIAVLSVLRCGEAFLPLDPFWPNERILSVASSS 189

Query: 464 KVALIVKSKSCFTATEDFQLEESDWLAEQSSCPVLEMSMNENREKVFGCSELVWPCQSMR 643
            V LI+ S+S F+ +   +L+ES WL +  SCP+L  S+ EN ++    ++    C + +
Sbjct: 190 NVDLIIGSQSSFSKSNLDRLDESHWLVKLISCPILRYSIEENLQECSSSTDFACHCSNEK 249

Query: 644 KRKFCYLMYTSGSTGKPKGVCGTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQE 823
           KR FCYLMYTSGS+GKPKGVCGTE GL NR+LWMQ ++PL  +E+LLFK+SISFIDHLQE
Sbjct: 250 KRSFCYLMYTSGSSGKPKGVCGTEQGLSNRFLWMQGMYPLTGQELLLFKSSISFIDHLQE 309

Query: 824 FLSGILSSVPLVIPPF 871
           FLS IL++  L+IPPF
Sbjct: 310 FLSSILTACVLIIPPF 325


>dbj|BAA97455.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1175

 Score =  259 bits (662), Expect = 6e-67
 Identities = 138/288 (47%), Positives = 183/288 (63%)
 Frame = +2

Query: 8   ASLNPNNISVIHASAGAQICRQFRHHDIXXXXXXXXXXXYNSYRESHSNPYLKGDEFFTY 187
           AS NP+ I+VI AS      R  R                    ES + P   GD+ FT+
Sbjct: 22  ASKNPHQIAVIQASG--LTARSIRS-------------------ESAAPPVYDGDKCFTF 60

Query: 188 SDVLSSVQSLSYRIRHVIDNPDDPYLVRPPQDCIVNDECVEEIGGPRIIGIYMVPSVEYI 367
           +++ SS+ SL+ R+  ++ N D           +   + V     P+++ +YM PSVEY+
Sbjct: 61  AELSSSIDSLTSRLHRILSNDDSQ---------VAGSDVVYM---PKVVALYMPPSVEYV 108

Query: 368 VALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALIVKSKSCFTATEDFQLEESDWLAE 547
           +++ SVLRCGEAFLPLDPSWP++R+LS+ISSS ++L++   +C  ++      ES WL E
Sbjct: 109 ISVFSVLRCGEAFLPLDPSWPRERVLSLISSSNISLVI---ACGLSSV-----ESHWLVE 160

Query: 548 QSSCPVLEMSMNENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPKGVCGTEIGLL 727
           ++ CPVL  SM+E      GCS  VWPC+  R+RKFCYLMYTSGSTGKPKGVCGTE GLL
Sbjct: 161 RNVCPVLLFSMDEKLSVETGCSSFVWPCKKERQRKFCYLMYTSGSTGKPKGVCGTEQGLL 220

Query: 728 NRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPF 871
           NR+LWMQEL+P+  E+   FKTS+ FIDH+QEFL  ILSS  LVIPPF
Sbjct: 221 NRFLWMQELYPVVGEQRFAFKTSVGFIDHIQEFLGAILSSTALVIPPF 268


>ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp.
           lyrata] gi|297316291|gb|EFH46714.1| hypothetical protein
           ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata]
          Length = 1120

 Score =  257 bits (656), Expect = 3e-66
 Identities = 136/288 (47%), Positives = 179/288 (62%)
 Frame = +2

Query: 8   ASLNPNNISVIHASAGAQICRQFRHHDIXXXXXXXXXXXYNSYRESHSNPYLKGDEFFTY 187
           AS NP+ I+VI AS      R+ R                    ES       GD+ FT+
Sbjct: 21  ASKNPHQIAVIQASG--LTARRIRS-------------------ESAEPSVYDGDKCFTF 59

Query: 188 SDVLSSVQSLSYRIRHVIDNPDDPYLVRPPQDCIVNDECVEEIGGPRIIGIYMVPSVEYI 367
           +++ SS+ SL+ R+R ++ + D              +   + +  P+++ +YM PSVEYI
Sbjct: 60  AELSSSIDSLTSRLRRILSDDDS------------QEAGSDVVYMPKVVALYMPPSVEYI 107

Query: 368 VALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALIVKSKSCFTATEDFQLEESDWLAE 547
           +++ SVLRCGEAFLPLDP+WP++R+LS+ISSS  +L++             LE S WL E
Sbjct: 108 ISVFSVLRCGEAFLPLDPTWPRERVLSLISSSNASLVIA------------LERSHWLVE 155

Query: 548 QSSCPVLEMSMNENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPKGVCGTEIGLL 727
              CPVL  SM+E   +  GCS  VWPC+  R+RKFCYLMYTSGSTGKPKGVCGTE GLL
Sbjct: 156 TKVCPVLLFSMDEKLSEETGCSSFVWPCKKQRQRKFCYLMYTSGSTGKPKGVCGTEQGLL 215

Query: 728 NRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPF 871
           NR++WMQEL+P+  E+   FKTS+ FIDHLQEFL  IL+S PLVIPPF
Sbjct: 216 NRFVWMQELYPVVGEQRSAFKTSVGFIDHLQEFLGPILNSTPLVIPPF 263


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