BLASTX nr result

ID: Coptis21_contig00031861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031861
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263556.1| PREDICTED: uncharacterized transporter lpg16...    59   5e-07
emb|CBI22474.3| unnamed protein product [Vitis vinifera]               55   4e-06
ref|XP_002885315.1| amino acid permease family protein [Arabidop...    54   1e-05

>ref|XP_002263556.1| PREDICTED: uncharacterized transporter lpg1691 [Vitis vinifera]
          Length = 504

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -1

Query: 128 MGEEELNGTSDAQEVTMKANPKLTLLPLIALIFYEVSGGPFG 3
           MGEE +   SD +    K NPKLTLLPLIALIFYEVSGGPFG
Sbjct: 1   MGEEGI--ASDVKNTGSKTNPKLTLLPLIALIFYEVSGGPFG 40


>emb|CBI22474.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = -1

Query: 101 SDAQEVTMKANPKLTLLPLIALIFYEVSGGPFG 3
           SD +    K NPKLTLLPLIALIFYEVSGGPFG
Sbjct: 10  SDVKNTGSKTNPKLTLLPLIALIFYEVSGGPFG 42


>ref|XP_002885315.1| amino acid permease family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331155|gb|EFH61574.1| amino acid permease
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = -1

Query: 128 MGEEELNGTSDAQEVTMKANPKLTLLPLIALIFYEVSGGPFG 3
           MGEE +    ++ E T K +PKLTLLPL+ LIFYEVSGGPFG
Sbjct: 1   MGEETIVNDENSSETT-KPSPKLTLLPLVFLIFYEVSGGPFG 41


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