BLASTX nr result
ID: Coptis21_contig00031858
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00031858 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299213.1| f-box family protein [Populus trichocarpa] g... 122 4e-26 ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife... 119 2e-25 ref|XP_003598633.1| F-box protein SKIP5 [Medicago truncatula] gi... 119 3e-25 ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula] gi... 119 3e-25 tpg|DAA63988.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea m... 118 4e-25 >ref|XP_002299213.1| f-box family protein [Populus trichocarpa] gi|222846471|gb|EEE84018.1| f-box family protein [Populus trichocarpa] Length = 251 Score = 122 bits (305), Expect = 4e-26 Identities = 55/69 (79%), Positives = 60/69 (86%) Frame = -1 Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28 LVC RWCYLACHPRLWLRVE++ K+ EPGVFP IE A+SAARPGDTILIAAGG +L N Sbjct: 48 LVCHRWCYLACHPRLWLRVEQSAKDLSEPGVFPSIEKAVSAARPGDTILIAAGGRHLASN 107 Query: 27 IQINKPLCL 1 IQINKPLCL Sbjct: 108 IQINKPLCL 116 >ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera] gi|297742690|emb|CBI35143.3| unnamed protein product [Vitis vinifera] Length = 254 Score = 119 bits (299), Expect = 2e-25 Identities = 54/69 (78%), Positives = 61/69 (88%) Frame = -1 Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28 LVC RW YLACHPRLWLRV+R++K+S EPGVFP IE A+SAARPGDTILIAAGG++L N Sbjct: 51 LVCHRWHYLACHPRLWLRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASN 110 Query: 27 IQINKPLCL 1 IQI KPLCL Sbjct: 111 IQIKKPLCL 119 >ref|XP_003598633.1| F-box protein SKIP5 [Medicago truncatula] gi|355487681|gb|AES68884.1| F-box protein SKIP5 [Medicago truncatula] Length = 170 Score = 119 bits (298), Expect = 3e-25 Identities = 54/69 (78%), Positives = 62/69 (89%) Frame = -1 Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28 LVC RW YLACHPRLWLRV+R++K+ EPGVFP+IETA+SA+RPGDTILIAAGG + V N Sbjct: 56 LVCHRWNYLACHPRLWLRVDRSVKDLSEPGVFPNIETAVSASRPGDTILIAAGGIHRVAN 115 Query: 27 IQINKPLCL 1 IQINKPLCL Sbjct: 116 IQINKPLCL 124 >ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula] gi|355487679|gb|AES68882.1| F-box protein SKIP5 [Medicago truncatula] Length = 260 Score = 119 bits (298), Expect = 3e-25 Identities = 54/69 (78%), Positives = 62/69 (89%) Frame = -1 Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28 LVC RW YLACHPRLWLRV+R++K+ EPGVFP+IETA+SA+RPGDTILIAAGG + V N Sbjct: 56 LVCHRWNYLACHPRLWLRVDRSVKDLSEPGVFPNIETAVSASRPGDTILIAAGGIHRVAN 115 Query: 27 IQINKPLCL 1 IQINKPLCL Sbjct: 116 IQINKPLCL 124 >tpg|DAA63988.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea mays] Length = 135 Score = 118 bits (296), Expect = 4e-25 Identities = 50/69 (72%), Positives = 62/69 (89%) Frame = -1 Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28 LVC RW +LACHPRLWLRVER I+++ EPGV+PD+E A+SAARPGDTILIAAGG+++ CN Sbjct: 46 LVCHRWRFLACHPRLWLRVERPIRDAMEPGVYPDLEAAVSAARPGDTILIAAGGSHVACN 105 Query: 27 IQINKPLCL 1 IQI KP+C+ Sbjct: 106 IQIKKPICI 114