BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031858
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299213.1| f-box family protein [Populus trichocarpa] g...   122   4e-26
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   119   2e-25
ref|XP_003598633.1| F-box protein SKIP5 [Medicago truncatula] gi...   119   3e-25
ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula] gi...   119   3e-25
tpg|DAA63988.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea m...   118   4e-25

>ref|XP_002299213.1| f-box family protein [Populus trichocarpa]
           gi|222846471|gb|EEE84018.1| f-box family protein
           [Populus trichocarpa]
          Length = 251

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = -1

Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28
           LVC RWCYLACHPRLWLRVE++ K+  EPGVFP IE A+SAARPGDTILIAAGG +L  N
Sbjct: 48  LVCHRWCYLACHPRLWLRVEQSAKDLSEPGVFPSIEKAVSAARPGDTILIAAGGRHLASN 107

Query: 27  IQINKPLCL 1
           IQINKPLCL
Sbjct: 108 IQINKPLCL 116


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/69 (78%), Positives = 61/69 (88%)
 Frame = -1

Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28
           LVC RW YLACHPRLWLRV+R++K+S EPGVFP IE A+SAARPGDTILIAAGG++L  N
Sbjct: 51  LVCHRWHYLACHPRLWLRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASN 110

Query: 27  IQINKPLCL 1
           IQI KPLCL
Sbjct: 111 IQIKKPLCL 119


>ref|XP_003598633.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487681|gb|AES68884.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 170

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = -1

Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28
           LVC RW YLACHPRLWLRV+R++K+  EPGVFP+IETA+SA+RPGDTILIAAGG + V N
Sbjct: 56  LVCHRWNYLACHPRLWLRVDRSVKDLSEPGVFPNIETAVSASRPGDTILIAAGGIHRVAN 115

Query: 27  IQINKPLCL 1
           IQINKPLCL
Sbjct: 116 IQINKPLCL 124


>ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487679|gb|AES68882.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 260

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = -1

Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28
           LVC RW YLACHPRLWLRV+R++K+  EPGVFP+IETA+SA+RPGDTILIAAGG + V N
Sbjct: 56  LVCHRWNYLACHPRLWLRVDRSVKDLSEPGVFPNIETAVSASRPGDTILIAAGGIHRVAN 115

Query: 27  IQINKPLCL 1
           IQINKPLCL
Sbjct: 116 IQINKPLCL 124


>tpg|DAA63988.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea mays]
          Length = 135

 Score =  118 bits (296), Expect = 4e-25
 Identities = 50/69 (72%), Positives = 62/69 (89%)
 Frame = -1

Query: 207 LVCQRWCYLACHPRLWLRVERTIKNSREPGVFPDIETAISAARPGDTILIAAGGNYLVCN 28
           LVC RW +LACHPRLWLRVER I+++ EPGV+PD+E A+SAARPGDTILIAAGG+++ CN
Sbjct: 46  LVCHRWRFLACHPRLWLRVERPIRDAMEPGVYPDLEAAVSAARPGDTILIAAGGSHVACN 105

Query: 27  IQINKPLCL 1
           IQI KP+C+
Sbjct: 106 IQIKKPICI 114