BLASTX nr result

ID: Coptis21_contig00031850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031850
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308396.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48
gb|ABK95536.1| unknown [Populus trichocarpa]                          194   6e-48
gb|ABI73993.1| omega-6 fatty acid desaturase [Descurainia sophia...   190   9e-47
gb|AAA92800.1| chloroplast omega-6 fatty acid desaturase [Arabid...   190   1e-46
ref|NP_194824.1| omega-6 fatty acid desaturase [Arabidopsis thal...   190   1e-46

>ref|XP_002308396.1| predicted protein [Populus trichocarpa] gi|222854372|gb|EEE91919.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  194 bits (493), Expect = 6e-48
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = +2

Query: 2   ACVFGFMAVGWPLIIYQTGILGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKASDEWN 181
           ACVFGFMAVGWPLIIY+ GI+GWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFK+SDEWN
Sbjct: 220 ACVFGFMAVGWPLIIYKAGIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKSSDEWN 279

Query: 182 AAQAQLNGTVHCDYPSWVEILCHDIN 259
           AAQAQLNGTVHCDYPSW+EILCHDIN
Sbjct: 280 AAQAQLNGTVHCDYPSWIEILCHDIN 305


>gb|ABK95536.1| unknown [Populus trichocarpa]
          Length = 444

 Score =  194 bits (493), Expect = 6e-48
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = +2

Query: 2   ACVFGFMAVGWPLIIYQTGILGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKASDEWN 181
           ACVFGFMAVGWPLIIY+ GI+GWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFK+SDEWN
Sbjct: 277 ACVFGFMAVGWPLIIYKAGIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKSSDEWN 336

Query: 182 AAQAQLNGTVHCDYPSWVEILCHDIN 259
           AAQAQLNGTVHCDYPSW+EILCHDIN
Sbjct: 337 AAQAQLNGTVHCDYPSWIEILCHDIN 362


>gb|ABI73993.1| omega-6 fatty acid desaturase [Descurainia sophia]
           gi|154813796|gb|ABS86963.1| chloroplast delta-12 fatty
           acid desaturase [Descurainia sophia]
          Length = 447

 Score =  190 bits (483), Expect = 9e-47
 Identities = 79/86 (91%), Positives = 83/86 (96%)
 Frame = +2

Query: 2   ACVFGFMAVGWPLIIYQTGILGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKASDEWN 181
           ACVF FMAVGWPLIIY+ GILGW+KFWLMPWLGYHFWMSTFTMVHHTAPHIPFK +DEWN
Sbjct: 279 ACVFAFMAVGWPLIIYKVGILGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWN 338

Query: 182 AAQAQLNGTVHCDYPSWVEILCHDIN 259
           AAQAQLNGTVHCDYPSW+EILCHDIN
Sbjct: 339 AAQAQLNGTVHCDYPSWIEILCHDIN 364


>gb|AAA92800.1| chloroplast omega-6 fatty acid desaturase [Arabidopsis thaliana]
          Length = 418

 Score =  190 bits (482), Expect = 1e-46
 Identities = 78/86 (90%), Positives = 83/86 (96%)
 Frame = +2

Query: 2   ACVFGFMAVGWPLIIYQTGILGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKASDEWN 181
           ACVF FMAVGWPLI+Y+ GILGW+KFWLMPWLGYHFWMSTFTMVHHTAPHIPFK +DEWN
Sbjct: 280 ACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWN 339

Query: 182 AAQAQLNGTVHCDYPSWVEILCHDIN 259
           AAQAQLNGTVHCDYPSW+EILCHDIN
Sbjct: 340 AAQAQLNGTVHCDYPSWIEILCHDIN 365


>ref|NP_194824.1| omega-6 fatty acid desaturase [Arabidopsis thaliana]
           gi|13432148|sp|P46312.2|FAD6C_ARATH RecName:
           Full=Omega-6 fatty acid desaturase, chloroplastic;
           Flags: Precursor gi|2980771|emb|CAA18198.1| chloroplast
           omega-6 fatty acid desaturase (fad6) [Arabidopsis
           thaliana] gi|7269997|emb|CAB79813.1| chloroplast omega-6
           fatty acid desaturase (fad6) [Arabidopsis thaliana]
           gi|15010640|gb|AAK73979.1| AT4g30950/F6I18_140
           [Arabidopsis thaliana] gi|16604360|gb|AAL24186.1|
           AT4g30950/F6I18_140 [Arabidopsis thaliana]
           gi|16604468|gb|AAL24240.1| AT4g30950/F6I18_140
           [Arabidopsis thaliana] gi|18958032|gb|AAL79589.1|
           AT4g30950/F6I18_140 [Arabidopsis thaliana]
           gi|21593581|gb|AAM65548.1| chloroplast omega-6 fatty
           acid desaturase (fad6) [Arabidopsis thaliana]
           gi|332660434|gb|AEE85834.1| omega-6 fatty acid
           desaturase [Arabidopsis thaliana]
          Length = 448

 Score =  190 bits (482), Expect = 1e-46
 Identities = 78/86 (90%), Positives = 83/86 (96%)
 Frame = +2

Query: 2   ACVFGFMAVGWPLIIYQTGILGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKASDEWN 181
           ACVF FMAVGWPLI+Y+ GILGW+KFWLMPWLGYHFWMSTFTMVHHTAPHIPFK +DEWN
Sbjct: 280 ACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWN 339

Query: 182 AAQAQLNGTVHCDYPSWVEILCHDIN 259
           AAQAQLNGTVHCDYPSW+EILCHDIN
Sbjct: 340 AAQAQLNGTVHCDYPSWIEILCHDIN 365


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