BLASTX nr result

ID: Coptis21_contig00031844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031844
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35900.3| unnamed protein product [Vitis vinifera]              217   9e-55
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   209   1e-52
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|NP_176883.5| AAA ATPase containing von Willebrand factor typ...   203   1e-50
gb|AAD10657.1| Hypothetical protein [Arabidopsis thaliana]            203   1e-50

>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/149 (74%), Positives = 124/149 (83%), Gaps = 1/149 (0%)
 Frame = -3

Query: 470  LNSVLEPEQKLSLAEKGGSMLENITAHPNLFLLATMNPGGAFGKKELSPALWNRFTEIWV 291
            LNSVLEPE+KL+LAEKGGS LE ITAHPN FLLATMNPGG +GKKELSPAL NRFTEIWV
Sbjct: 1319 LNSVLEPERKLALAEKGGSSLEIITAHPNFFLLATMNPGGDYGKKELSPALRNRFTEIWV 1378

Query: 290  PPVSEMNELRSIALS-FVGKSLSYTVDPMLKFWEWFSQLHTSRTLTVRDLLSWVDFMNTT 114
            P VS+++ELRSIAL  F    + + VDPML FWEWF+QL T R LTVRDLLSWV F+N T
Sbjct: 1379 PCVSDLDELRSIALQRFSNPKILWIVDPMLNFWEWFNQLQTGRALTVRDLLSWVAFINVT 1438

Query: 113  VTSFESPNYAFLHGAFLVLLDGLSLGTGI 27
              S + P+YAFLHGAFLVLLDGLSLGT +
Sbjct: 1439 EKSLQ-PDYAFLHGAFLVLLDGLSLGTSL 1466


>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score =  209 bits (533), Expect = 1e-52
 Identities = 105/157 (66%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470  LNSVLEPEQKLSLAEKGGSMLENITAHPNLFLLATMNPGGAFGKKELSPALWNRFTEIWV 291
            +NSVLEPE+KL+LAEKGG  LE +TAHP   L ATMNPGG +GKKELSPAL NRFTEIWV
Sbjct: 1579 INSVLEPERKLALAEKGGEFLETVTAHPEFSLFATMNPGGDYGKKELSPALRNRFTEIWV 1638

Query: 290  PPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLTVRDLLSWVDFMNTT 114
            PPV E++ELRSIAL+ +     ++ VD ML FWEWF+ L + R LTVRDLLSWV F+++T
Sbjct: 1639 PPVGELDELRSIALTRISNPGDTHLVDLMLNFWEWFNHLQSGRMLTVRDLLSWVSFIDST 1698

Query: 113  VTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKL 3
              +   P YAFLHGAFL+LLDGLSLGTG+SK DA +L
Sbjct: 1699 EMNL-GPEYAFLHGAFLILLDGLSLGTGMSKRDAEEL 1734


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  204 bits (518), Expect = 8e-51
 Identities = 104/155 (67%), Positives = 120/155 (77%), Gaps = 1/155 (0%)
 Frame = -3

Query: 470  LNSVLEPEQKLSLAEKGGSMLENITAHPNLFLLATMNPGGAFGKKELSPALWNRFTEIWV 291
            LNSVLEPE+KLSLAEKGG ++ENITAH N F+LATMNPGG +GKKELSPAL NRFTEIWV
Sbjct: 1503 LNSVLEPERKLSLAEKGGPVMENITAHENFFVLATMNPGGDYGKKELSPALRNRFTEIWV 1562

Query: 290  PPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLTVRDLLSWVDFMNTT 114
            PPV +++EL  IA   +    LSY V   LKFWEWF++L   R LTVRDLLSW+ F+  T
Sbjct: 1563 PPVCDLDELGDIASKRLSNPELSYIVGATLKFWEWFNKLEKGRALTVRDLLSWIQFIMVT 1622

Query: 113  VTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAG 9
                  P+ AFLHG FLVLLDG+SLGTGIS+ DAG
Sbjct: 1623 KEGL-GPDCAFLHGLFLVLLDGISLGTGISRKDAG 1656


>ref|NP_176883.5| AAA ATPase containing von Willebrand factor type A domain-containing
            protein [Arabidopsis thaliana]
            gi|332196477|gb|AEE34598.1| AAA ATPase containing von
            Willebrand factor type A domain-containing protein
            [Arabidopsis thaliana]
          Length = 5393

 Score =  203 bits (516), Expect = 1e-50
 Identities = 103/157 (65%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470  LNSVLEPEQKLSLAEKGGSMLENITAHPNLFLLATMNPGGAFGKKELSPALWNRFTEIWV 291
            +NSVLE ++KLSLAEKGG +LE + AH + F+LATMNPGG +GKKELSPAL NRFTEIWV
Sbjct: 1533 MNSVLETDRKLSLAEKGGPVLEEVVAHEDFFVLATMNPGGDYGKKELSPALRNRFTEIWV 1592

Query: 290  PPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLTVRDLLSWVDFMNTT 114
            PP+++  ELRSIA S +     S  VDP++ FWEWF++LHT RTLTVRDLLSWV F+N  
Sbjct: 1593 PPITDTEELRSIAFSGLSSLKESNVVDPIINFWEWFNRLHTGRTLTVRDLLSWVAFVNMA 1652

Query: 113  VTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKL 3
              S   P YA LHGAFLVLLDGLSLGTG S  D   L
Sbjct: 1653 TESL-GPAYAILHGAFLVLLDGLSLGTGFSGRDGQDL 1688


>gb|AAD10657.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 5138

 Score =  203 bits (516), Expect = 1e-50
 Identities = 103/157 (65%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470  LNSVLEPEQKLSLAEKGGSMLENITAHPNLFLLATMNPGGAFGKKELSPALWNRFTEIWV 291
            +NSVLE ++KLSLAEKGG +LE + AH + F+LATMNPGG +GKKELSPAL NRFTEIWV
Sbjct: 1343 MNSVLETDRKLSLAEKGGPVLEEVVAHEDFFVLATMNPGGDYGKKELSPALRNRFTEIWV 1402

Query: 290  PPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLTVRDLLSWVDFMNTT 114
            PP+++  ELRSIA S +     S  VDP++ FWEWF++LHT RTLTVRDLLSWV F+N  
Sbjct: 1403 PPITDTEELRSIAFSGLSSLKESNVVDPIINFWEWFNRLHTGRTLTVRDLLSWVAFVNMA 1462

Query: 113  VTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKL 3
              S   P YA LHGAFLVLLDGLSLGTG S  D   L
Sbjct: 1463 TESL-GPAYAILHGAFLVLLDGLSLGTGFSGRDGQDL 1498


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