BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031835
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
emb|CBI19766.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
gb|ABK26521.1| unknown [Picea sitchensis]                             134   8e-30

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/138 (59%), Positives = 110/138 (79%)
 Frame = +1

Query: 1    LGPKPNRGTFVSIILAYSLAGMVEQGNSTFSSMTNDYQISPGSEHYSAMLDLLGRSHRLG 180
            +G KP+RGTF+SII A+SL+GMV++G   FSSM  DYQI PG EH+SAM+DLLGRS +LG
Sbjct: 623  MGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLG 682

Query: 181  EAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFEMGPKSANIYRLLVQLYG 360
            EA+ F+E+M IE D  IW ALLTAS++HGNI LA+RA ECL E+ P + +I++ ++Q+Y 
Sbjct: 683  EAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYA 742

Query: 361  LSGRSDDAVKVRKPQKRS 414
            LSG+ +D  K+RK +KRS
Sbjct: 743  LSGKFEDVSKLRKSEKRS 760


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/128 (60%), Positives = 103/128 (80%)
 Frame = +1

Query: 1   LGPKPNRGTFVSIILAYSLAGMVEQGNSTFSSMTNDYQISPGSEHYSAMLDLLGRSHRLG 180
           +G KP+RGTF+SII A+SL+GMV++G   FSSM  DYQI PG EH+SAM+DLLGRS +LG
Sbjct: 277 MGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLG 336

Query: 181 EAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFEMGPKSANIYRLLVQLYG 360
           EA+ F+E+M IE D  IW ALLTAS++HGNI LA+RA ECL E+ P + +I++ ++Q+Y 
Sbjct: 337 EAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYA 396

Query: 361 LSGRSDDA 384
           LSG+ +DA
Sbjct: 397 LSGKFEDA 404


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/140 (54%), Positives = 99/140 (70%)
 Frame = +1

Query: 1    LGPKPNRGTFVSIILAYSLAGMVEQGNSTFSSMTNDYQISPGSEHYSAMLDLLGRSHRLG 180
            LG +PNRGT  SII AY +AGMV++G   FSS+T ++QI P  +HY AM+DL GRS RL 
Sbjct: 618  LGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLA 677

Query: 181  EAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFEMGPKSANIYRLLVQLYG 360
            +A+ F+E+M IE D +IW +LLTA R HGN+ LAV AA+ L E+ P +  IYRLLVQ Y 
Sbjct: 678  DAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYA 737

Query: 361  LSGRSDDAVKVRKPQKRSGV 420
            L G+ +  +KVRK  K S +
Sbjct: 738  LYGKFEQTLKVRKLGKESAM 757


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Cucumis sativus]
          Length = 1463

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/140 (54%), Positives = 99/140 (70%)
 Frame = +1

Query: 1    LGPKPNRGTFVSIILAYSLAGMVEQGNSTFSSMTNDYQISPGSEHYSAMLDLLGRSHRLG 180
            LG +PNRGT  SII AY +AGMV++G   FSS+T ++QI P  +HY AM+DL GRS RL 
Sbjct: 618  LGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLA 677

Query: 181  EAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFEMGPKSANIYRLLVQLYG 360
            +A+ F+E+M IE D +IW +LLTA R HGN+ LAV AA+ L E+ P +  IYRLLVQ Y 
Sbjct: 678  DAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYA 737

Query: 361  LSGRSDDAVKVRKPQKRSGV 420
            L G+ +  +KVRK  K S +
Sbjct: 738  LYGKFEQTLKVRKLGKESAM 757


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/139 (49%), Positives = 93/139 (66%)
 Frame = +1

Query: 4   GPKPNRGTFVSIILAYSLAGMVEQGNSTFSSMTNDYQISPGSEHYSAMLDLLGRSHRLGE 183
           G KPN+ TFV ++   S AG+V++G + F SMT D+ ISP +EHYS M+DL GR+  L E
Sbjct: 94  GVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDE 153

Query: 184 AVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFEMGPKSANIYRLLVQLYGL 363
           A+NF+ +M +E + ++W +LL A RVHGNI LA RA E L E+ P++   Y LL  +Y  
Sbjct: 154 ALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAA 213

Query: 364 SGRSDDAVKVRKPQKRSGV 420
           +GR DDA KVRK  K   V
Sbjct: 214 AGRWDDAGKVRKMMKDRSV 232