BLASTX nr result

ID: Coptis21_contig00031830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031830
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...    87   1e-15
emb|CBI32505.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_003555008.1| PREDICTED: uncharacterized membrane protein ...    65   4e-09

>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/72 (61%), Positives = 48/72 (66%)
 Frame = +2

Query: 83  FLRYLCYSXXXXXXXXXXXXXXXXKVAIFCPFVFLVIAFGDTGVVIGLWPVHLIWTSYCI 262
           FL YL YS                K AIF PFVFLVIAFGDTG+VIGLWP+HLIW+ YCI
Sbjct: 7   FLNYLLYSIIFFPIFLFLFFLGCIKGAIFSPFVFLVIAFGDTGIVIGLWPLHLIWSMYCI 66

Query: 263 ATSKKFGPCMKC 298
             SK+FGP MKC
Sbjct: 67  IKSKRFGPYMKC 78


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/72 (58%), Positives = 47/72 (65%)
 Frame = +2

Query: 83  FLRYLCYSXXXXXXXXXXXXXXXXKVAIFCPFVFLVIAFGDTGVVIGLWPVHLIWTSYCI 262
           FL YLCY                 K AIF PFV LVIAFGDTGVVIGLWP+HL+W+ YC+
Sbjct: 7   FLSYLCYFLFFLPVCVLLFILAIIKGAIFSPFVLLVIAFGDTGVVIGLWPLHLVWSIYCL 66

Query: 263 ATSKKFGPCMKC 298
             +KKFGP MKC
Sbjct: 67  IKTKKFGPYMKC 78


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/72 (55%), Positives = 44/72 (61%)
 Frame = +2

Query: 83  FLRYLCYSXXXXXXXXXXXXXXXXKVAIFCPFVFLVIAFGDTGVVIGLWPVHLIWTSYCI 262
           FL YLCY                 K  IF PFVFLVIAFGD GVV+GLWP HL+WT YCI
Sbjct: 7   FLTYLCYFIFFLPVFVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLVWTVYCI 66

Query: 263 ATSKKFGPCMKC 298
             +KKF P +KC
Sbjct: 67  VRTKKFDPYLKC 78


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/72 (55%), Positives = 44/72 (61%)
 Frame = +2

Query: 83  FLRYLCYSXXXXXXXXXXXXXXXXKVAIFCPFVFLVIAFGDTGVVIGLWPVHLIWTSYCI 262
           FL YLCY                 K  IF PFVFLVIAFGD GVV+GLWP HL+WT YCI
Sbjct: 7   FLTYLCYFIFFLPVFVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLVWTVYCI 66

Query: 263 ATSKKFGPCMKC 298
             +KKF P +KC
Sbjct: 67  NRTKKFDPYLKC 78


>ref|XP_003555008.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 578

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = +2

Query: 155 KVAIFCPFVFLVIAFGDTGVVIGLWPVHLIWTSYCIATSKKFGPCMK 295
           K  IFCP V LV+  G++ ++ GLWP+H IWT YC+  SKK GP +K
Sbjct: 31  KGVIFCPLVCLVMTIGNSAIIHGLWPIHCIWTYYCVVRSKKLGPALK 77


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