BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031772
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...    70   1e-10
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...    60   2e-07
ref|NP_196011.1| ABC transporter B family member 29 [Arabidopsis...    57   2e-06
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...    56   3e-06

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
 Frame = +3

Query: 21  ITTPNSS--LIFLKPKTKPINLYT-QINLSLKTSFNTHRISCKASIPTLQQPILTSTHXX 191
           I  P+SS  L+ L+ K +P  L+    NL++K SF       KAS+        ++ H  
Sbjct: 102 IAPPSSSPSLLGLRFKPRPTKLFAFSPNLTVKPSF-------KASLKPFNFISPSTFH-- 152

Query: 192 XXXXXXXXXXXXLSLPTLEPIKPYIISEWKSVIKGWICSMISVYCLSILVPRVGKFSSVL 371
                           +LE IKPY++SE+K ++KGW CS++SVY LS +VP+VGKFS+ L
Sbjct: 153 ----------------SLEAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATL 196

Query: 372 SVVN 383
           S ++
Sbjct: 197 SKID 200


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
 Frame = +3

Query: 21  ITTPNSS--LIFLKPKTKPINLYT-QINLSLKTSFNTHRISCKASIPTLQQPILTSTHXX 191
           I  P+SS  L+ L+ K +P  L+    NL++K SF       KAS+        ++ H  
Sbjct: 8   IAPPSSSPSLLGLRFKPRPTKLFAFSPNLTVKPSF-------KASLKPFNFISPSTFH-- 58

Query: 192 XXXXXXXXXXXXLSLPTLEPIKPYIISEWKSVIKGWICSMISVYCLSILVPRVGKFSSVL 371
                           +LE IKPY++SE+K ++KGW CS++SVY LS +VP+VGKFS+ L
Sbjct: 59  ----------------SLEAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATL 102

Query: 372 SVVN 383
           S ++
Sbjct: 103 SKID 106


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
           PREDICTED: ABC transporter B family member 29,
           chloroplastic-like [Cucumis sativus]
          Length = 643

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/48 (45%), Positives = 39/48 (81%)
 Frame = +3

Query: 240 TLEPIKPYIISEWKSVIKGWICSMISVYCLSILVPRVGKFSSVLSVVN 383
           T + + PYI+S+ K ++ GW+CS++SV+ LS++VP++GKFSS++  V+
Sbjct: 74  TFKTLVPYILSQRKHILAGWLCSVVSVFSLSLIVPKIGKFSSIIDKVD 121


>ref|NP_196011.1| ABC transporter B family member 29 [Arabidopsis thaliana]
           gi|75335698|sp|Q9LZB8.1|AB29B_ARATH RecName: Full=ABC
           transporter B family member 29, chloroplastic; Short=ABC
           transporter ABCB.29; Short=AtABCB29; AltName: Full=ABC2
           homolog 12; Flags: Precursor gi|7406401|emb|CAB85511.1|
           ABC transporter-like protein [Arabidopsis thaliana]
           gi|16604565|gb|AAL24084.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|20259177|gb|AAM14304.1| putative ABC transporter
           [Arabidopsis thaliana] gi|332003288|gb|AED90671.1| ABC
           transporter B family member 29 [Arabidopsis thaliana]
          Length = 634

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 231 SLPTLEPIKPYIISEWKSVIKGWICSMISVYCLSILVPRVGKFSSVLS 374
           SL  LE IKPY+ SE K+V+ GW+CS +SV  LS +VPR+G F+S L+
Sbjct: 58  SLKALETIKPYLQSESKTVLLGWLCSCVSVVSLSQIVPRLGSFTSNLN 105


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/48 (45%), Positives = 38/48 (79%)
 Frame = +3

Query: 240 TLEPIKPYIISEWKSVIKGWICSMISVYCLSILVPRVGKFSSVLSVVN 383
           +L  IKPY++S+ K+++ GW+CS+ISV  LS +VPR+G+FS+ +  ++
Sbjct: 78  SLSTIKPYVLSQQKTILLGWLCSVISVLSLSQIVPRIGQFSANIGKID 125