BLASTX nr result
ID: Coptis21_contig00031762
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00031762 (512 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519341.1| Chromatin remodelling complex ATPase chain i... 129 2e-28 ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated... 126 2e-27 ref|XP_002315473.1| chromatin remodeling complex subunit [Populu... 123 2e-26 ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated... 114 6e-24 ref|XP_004160655.1| PREDICTED: SWI/SNF-related matrix-associated... 111 7e-23 >ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] gi|223541656|gb|EEF43205.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] Length = 674 Score = 129 bits (325), Expect = 2e-28 Identities = 77/149 (51%), Positives = 88/149 (59%), Gaps = 16/149 (10%) Frame = -2 Query: 445 DDWNFSVEELDYLEKDAYRKIAERV---------SSSQDSLHXXXXXXXXXXXXXXXXXX 293 DDW SVEELD LEKDAY KIA++ S S+ + Sbjct: 5 DDWGLSVEELDSLEKDAYMKIAQQQRQQQNRHFHSLSKKGIALLFQVQSSPSQPTTLLTP 64 Query: 292 PGVKEMP-------LRKLSVKLFLHATGNIAAKFQYNTILVDAIRNVPKATWHSKERLWM 134 K P L KLSVK LHATGNIAAKF Y+ +LV AIR VPKATW +KERLW+ Sbjct: 65 IAPKANPEHESSKILPKLSVKFILHATGNIAAKFSYDPVLVAAIRKVPKATWDAKERLWI 124 Query: 133 FPMSSLSSAEKVLSEVKGATVEVEKLDRL 47 FPMSSLSSAEK+L+E G +VEVE LD L Sbjct: 125 FPMSSLSSAEKILNETSGFSVEVENLDPL 153 >ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Vitis vinifera] gi|297736823|emb|CBI26024.3| unnamed protein product [Vitis vinifera] Length = 677 Score = 126 bits (317), Expect = 2e-27 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 24/175 (13%) Frame = -2 Query: 454 MELDDWNFSVEELDYLEKDAYRKIAERVSSSQ------DSLHXXXXXXXXXXXXXXXXXX 293 ME +DW+ S EELD LE+DA+R+IA R SSS +S+H Sbjct: 1 METEDWDLSAEELDSLERDAFRQIALRNSSSSTASVSNNSIHSSNPNPNPIIPSLPRK-- 58 Query: 292 PGVKEMP------------------LRKLSVKLFLHATGNIAAKFQYNTILVDAIRNVPK 167 V ++P L KLSVK FLHA+GNIAAKF Y+ ++V A R + K Sbjct: 59 --VDDLPPGSRIPPPSTVVSNCSKELHKLSVKFFLHASGNIAAKFSYDPVVVGAFRKISK 116 Query: 166 ATWHSKERLWMFPMSSLSSAEKVLSEVKGATVEVEKLDRLXXXXXXXXXXXQDLR 2 A+W++KERLWMFP+SSLSSAEKVL E+ G VE+E +D L DLR Sbjct: 117 ASWNAKERLWMFPLSSLSSAEKVLHEITGINVEIENIDPLVRRAIDAATAVPDLR 171 >ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864513|gb|EEF01644.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 670 Score = 123 bits (308), Expect = 2e-26 Identities = 72/156 (46%), Positives = 83/156 (53%), Gaps = 8/156 (5%) Frame = -2 Query: 445 DDWNFSVEELDYLEKDAYRKIAERVSSSQDSLHXXXXXXXXXXXXXXXXXXP-------- 290 DDW S EE D LE+DA KIA + Q Sbjct: 2 DDWGLSAEEFDSLERDALLKIASQQQQQQQQQQQQQPSASSSFNQQQNQQLHFSNKPIFN 61 Query: 289 GVKEMPLRKLSVKLFLHATGNIAAKFQYNTILVDAIRNVPKATWHSKERLWMFPMSSLSS 110 + L KLSVK LHATGNIAAKF Y+ +LV A+R VPKA W++KERLW+FP+SSL S Sbjct: 62 SPSKKALPKLSVKFILHATGNIAAKFLYDPVLVGALRKVPKANWNAKERLWIFPVSSLLS 121 Query: 109 AEKVLSEVKGATVEVEKLDRLXXXXXXXXXXXQDLR 2 AEKVLSE+ G VEVEKLD L DLR Sbjct: 122 AEKVLSEISGFNVEVEKLDTLVQRAIAAASVAPDLR 157 >ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Glycine max] Length = 665 Score = 114 bits (286), Expect = 6e-24 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 9/142 (6%) Frame = -2 Query: 445 DDWNFSVEELDYLEKDAYRKIAERVSSS---------QDSLHXXXXXXXXXXXXXXXXXX 293 DDW+ S E+LD LE+DA++KIA+ + + Q Sbjct: 5 DDWDLSAEDLDSLERDAFQKIAQLRNPTPPPSSPHPIQVDAFSQGARALPTTLKSGTNND 64 Query: 292 PGVKEMPLRKLSVKLFLHATGNIAAKFQYNTILVDAIRNVPKATWHSKERLWMFPMSSLS 113 KE+P K SVK FLH++GN+AAKFQY+ +++ A R +P+++W++KERLW+FP+SSLS Sbjct: 65 NQAKELP--KFSVKFFLHSSGNVAAKFQYDQVVIAAFRRIPRSSWNAKERLWIFPLSSLS 122 Query: 112 SAEKVLSEVKGATVEVEKLDRL 47 AEKV+ E+ G V+V+ LD L Sbjct: 123 EAEKVIGEIPGYNVQVDNLDPL 144 >ref|XP_004160655.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Cucumis sativus] Length = 725 Score = 111 bits (277), Expect = 7e-23 Identities = 56/96 (58%), Positives = 67/96 (69%) Frame = -2 Query: 289 GVKEMPLRKLSVKLFLHATGNIAAKFQYNTILVDAIRNVPKATWHSKERLWMFPMSSLSS 110 G KE P KLSVK FLH++GN+AAKF Y+ +L+DA+R +PKATW+ KERLWMFP+SSLS Sbjct: 124 GAKERP--KLSVKFFLHSSGNVAAKFSYDQVLIDAVRKIPKATWNGKERLWMFPVSSLSV 181 Query: 109 AEKVLSEVKGATVEVEKLDRLXXXXXXXXXXXQDLR 2 AE VL +V G VEVE LD L DLR Sbjct: 182 AESVLRDVVGFKVEVENLDNLVHRAIVAASLVPDLR 217