BLASTX nr result

ID: Coptis21_contig00031747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031747
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42257.1| aminoacyl-tRNA synthetase [Beta vulgaris]              115   4e-24
ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257...   114   6e-24
emb|CBI15298.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243...   114   1e-23
ref|XP_002516593.1| hypothetical protein RCOM_0803470 [Ricinus c...   112   2e-23

>gb|AEV42257.1| aminoacyl-tRNA synthetase [Beta vulgaris]
          Length = 597

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/110 (50%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
 Frame = +1

Query: 10  QPDAVSFINNALKEGTDLCTFRKDRTGGDGTGVAYWSDGDAVIGYRLYREVTNVQMTPR- 186
           QPD VS+IN ALK+G  +  FRKD+ G D  G++YW DG++VIG+RLYREV NV +  + 
Sbjct: 151 QPDLVSYINGALKQGDQISNFRKDKIGQDRNGISYWYDGNSVIGHRLYREVNNVNLKQKQ 210

Query: 187 KGKGRLAQPTNSRQWETLATNLDEFQQISDQLSSSEIVDEAAVGEVIKNE 336
           +GK  L     + +WETLATN++EF+++S++LS+ ++  EAAV E I+ E
Sbjct: 211 RGKNCLDLQETNLKWETLATNIEEFRKVSEKLSACQVGVEAAVHETIETE 260


>ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257807 [Vitis vinifera]
           gi|296081950|emb|CBI20955.3| unnamed protein product
           [Vitis vinifera]
          Length = 340

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/112 (49%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   AFQPDAVSFINNALKEGTDLCTFRKDRTGGDGTGVAYWSDGDAVIGYRLYREVTNVQ-MT 180
           A Q D VS+IN+A+K GT+L  FRK+  GGD  G  YW DG+ V+G+RLYREV      T
Sbjct: 163 AEQNDTVSYINDAIKHGTELSCFRKNNIGGDRNGTTYWYDGNTVLGHRLYREVKKFDPKT 222

Query: 181 PRKGKGRLAQPTNSRQWETLATNLDEFQQISDQLSSSEIVDEAAVGEVIKNE 336
             +GKG LA P  S +WETLATNL+EF++++D  SSS++  + AV ++++ +
Sbjct: 223 KVRGKGCLAPPLASFKWETLATNLEEFRKVADDFSSSKVTVQVAVSKIVQTD 274


>emb|CBI15298.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/109 (48%), Positives = 75/109 (68%)
 Frame = +1

Query: 10  QPDAVSFINNALKEGTDLCTFRKDRTGGDGTGVAYWSDGDAVIGYRLYREVTNVQMTPRK 189
           Q D   FI+N++K G  L  FRK+R GGD  G++YW + D +IG+RLYRE+  V++   K
Sbjct: 119 QEDIRIFIDNSIKHGVQLSAFRKERVGGDSHGISYWYEDDPIIGHRLYREIRKVEVKKAK 178

Query: 190 GKGRLAQPTNSRQWETLATNLDEFQQISDQLSSSEIVDEAAVGEVIKNE 336
            KG    P  S QWET+ATNLDEFQ +S++L SS+   EA++G+ +KN+
Sbjct: 179 VKGSQCLPNASYQWETVATNLDEFQDVSEKLFSSKNRTEASLGKKLKND 227


>ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243405 [Vitis vinifera]
          Length = 718

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/109 (48%), Positives = 75/109 (68%)
 Frame = +1

Query: 10  QPDAVSFINNALKEGTDLCTFRKDRTGGDGTGVAYWSDGDAVIGYRLYREVTNVQMTPRK 189
           Q D   FI+N++K G  L  FRK+R GGD  G++YW + D +IG+RLYRE+  V++   K
Sbjct: 236 QEDIRIFIDNSIKHGVQLSAFRKERVGGDSHGISYWYEDDPIIGHRLYREIRKVEVKKAK 295

Query: 190 GKGRLAQPTNSRQWETLATNLDEFQQISDQLSSSEIVDEAAVGEVIKNE 336
            KG    P  S QWET+ATNLDEFQ +S++L SS+   EA++G+ +KN+
Sbjct: 296 VKGSQCLPNASYQWETVATNLDEFQDVSEKLFSSKNRTEASLGKKLKND 344


>ref|XP_002516593.1| hypothetical protein RCOM_0803470 [Ricinus communis]
           gi|223544413|gb|EEF45934.1| hypothetical protein
           RCOM_0803470 [Ricinus communis]
          Length = 485

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/109 (50%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
 Frame = +1

Query: 7   FQPDAVSFINNALKEGTDLCTFRKDRTGGDGTGVAYWSDGDAVIGYRLYREVTNV-QMTP 183
           +Q D+VS+IN+ALK GT++ +FRKD+ G DG    YW DG  VIG+RLY+EV    Q T 
Sbjct: 128 WQDDSVSYINDALKSGTEISSFRKDKIGEDGNAACYWCDGGPVIGHRLYKEVKKTDQKTK 187

Query: 184 RKGKGRLAQPTNSRQWETLATNLDEFQQISDQLSSSEIVDEAAVGEVIK 330
            KGK   +    S +W+TLATNL+EFQ+  D+LSSS +V   AVG  ++
Sbjct: 188 WKGKASYSLTAVSSEWQTLATNLEEFQKAVDELSSSRVVGRIAVGRTVE 236


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