BLASTX nr result

ID: Coptis21_contig00031746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031746
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   123   1e-26
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   120   9e-26
emb|CBI18341.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_003600705.1| Condensin complex subunit [Medicago truncatu...   117   1e-24
emb|CAN81666.1| hypothetical protein VITISV_023751 [Vitis vinifera]   116   2e-24

>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/86 (69%), Positives = 74/86 (86%)
 Frame = -2

Query: 280 IILQRGLSDRSLSVSKECLKLMKDEWLVKSCNGDPLLLLQFLDVETYESVGEAVMESLLK 101
           IILQRGL+DRS +V+KECLKL+KDEWLVK CNGDP+ LL++LDVETYE VGE+VME+LLK
Sbjct: 241 IILQRGLADRSAAVTKECLKLLKDEWLVKCCNGDPIELLKYLDVETYELVGESVMEALLK 300

Query: 100 DGMVDVREDQSIRHFIESTLDTNEGE 23
            G V +++DQSIR FI +T +  EGE
Sbjct: 301 AGAVQLQDDQSIRQFIVATSNEIEGE 326


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
           gi|297745068|emb|CBI38660.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/86 (68%), Positives = 73/86 (84%)
 Frame = -2

Query: 280 IILQRGLSDRSLSVSKECLKLMKDEWLVKSCNGDPLLLLQFLDVETYESVGEAVMESLLK 101
           IILQRGL+DRS +V+KECLKL+KDEWLVK CNGDP+ LL++LDVETYE VGE+VME LLK
Sbjct: 241 IILQRGLADRSAAVTKECLKLLKDEWLVKCCNGDPIELLKYLDVETYELVGESVMEVLLK 300

Query: 100 DGMVDVREDQSIRHFIESTLDTNEGE 23
            G V +++DQSI+ FI +T +  EGE
Sbjct: 301 AGAVQLQDDQSIQQFIVATSNEIEGE 326


>emb|CBI18341.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = -2

Query: 280 IILQRGLSDRSLSVSKECLKLMKDEWLVKSCNGDPLLLLQFLDVETYESVGEAVMESLLK 101
           IILQRG +D S +V+KECLKL+KDEWLVK CNGDP+ LL++LDVETYE VGE+VME+LLK
Sbjct: 127 IILQRGHTDCSAAVTKECLKLLKDEWLVKCCNGDPIELLKYLDVETYELVGESVMEALLK 186

Query: 100 DGMVDVREDQSIRHFIESTLDTNEGE 23
            G V +++DQSIR FI ST +  EGE
Sbjct: 187 AGAVQLQDDQSIRQFIVSTSNEIEGE 212


>ref|XP_003600705.1| Condensin complex subunit [Medicago truncatula]
           gi|355489753|gb|AES70956.1| Condensin complex subunit
           [Medicago truncatula]
          Length = 1076

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/86 (66%), Positives = 69/86 (80%)
 Frame = -2

Query: 280 IILQRGLSDRSLSVSKECLKLMKDEWLVKSCNGDPLLLLQFLDVETYESVGEAVMESLLK 101
           IIL+RGL+DRS  VSKEC KL+KDEWL+K CNGDPL LL++LDVETYESV E+VME+LLK
Sbjct: 274 IILRRGLADRSAGVSKECFKLLKDEWLIKCCNGDPLELLKYLDVETYESVSESVMEALLK 333

Query: 100 DGMVDVREDQSIRHFIESTLDTNEGE 23
            G+V ++   SI+  I S  DT EGE
Sbjct: 334 AGLVKLKNGASIQQHITSNSDTAEGE 359


>emb|CAN81666.1| hypothetical protein VITISV_023751 [Vitis vinifera]
          Length = 934

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 71/85 (83%)
 Frame = -2

Query: 277 ILQRGLSDRSLSVSKECLKLMKDEWLVKSCNGDPLLLLQFLDVETYESVGEAVMESLLKD 98
           + +RGL+DRS +V+KECLKL+KDEWLVK CNG P+ LL++LDVETYE VGE+VME+LLK 
Sbjct: 213 VSERGLTDRSAAVTKECLKLLKDEWLVKCCNGXPIELLKYLDVETYELVGESVMEALLKA 272

Query: 97  GMVDVREDQSIRHFIESTLDTNEGE 23
           G V +++DQSIR FI ST +  EGE
Sbjct: 273 GAVQLQDDQSIRQFIVSTSNEIEGE 297


Top