BLASTX nr result

ID: Coptis21_contig00031731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031731
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278677.2| PREDICTED: aspartic proteinase nepenthesin-1...   345   5e-93
ref|XP_004143702.1| PREDICTED: aspartic proteinase nepenthesin-2...   337   1e-90
ref|NP_189198.1| aspartyl protease family protein [Arabidopsis t...   325   8e-87
ref|XP_002875271.1| hypothetical protein ARALYDRAFT_484331 [Arab...   323   2e-86
ref|XP_002311432.1| predicted protein [Populus trichocarpa] gi|2...   318   7e-85

>ref|XP_002278677.2| PREDICTED: aspartic proteinase nepenthesin-1-like [Vitis vinifera]
          Length = 458

 Score =  345 bits (885), Expect = 5e-93
 Identities = 165/229 (72%), Positives = 190/229 (82%), Gaps = 1/229 (0%)
 Frame = -2

Query: 717 SPLKSLHSDTSRLSILFSTLTNNPKSLKSPLVSGAPMGSGQYFVDFSIGTPPQKLLLVAD 538
           +P ++L  D+ RLS  FS L + P+SLKSP+VSGA  GSGQYFVD  +GTPPQKLLLVAD
Sbjct: 49  TPSQALSFDSHRLSFFFSAL-HTPQSLKSPVVSGASTGSGQYFVDLRLGTPPQKLLLVAD 107

Query: 537 TGSDLVWVKCSACKDCTKHLPGSFFFARHSSTFSPFHCYDRQCRLVP-HSEHVCNSTRLH 361
           TGSDLVWVKCSAC++CT+H PGS F ARHS+TFSP HCYD  C+LVP    H CN  RLH
Sbjct: 108 TGSDLVWVKCSACRNCTRHTPGSAFLARHSTTFSPNHCYDSACQLVPLPKHHRCNHARLH 167

Query: 360 SSCRYEYTYGDESKTSGFFSKETTTLNTSSGHEAKLRNLEFGCGFRVSGPSVSGSSFNGA 181
           S CRYEY+YGD SKTSGFFSKETTTLNTSSG EAKL+ + FGC FR+SGPSVSG+SFNGA
Sbjct: 168 SPCRYEYSYGDGSKTSGFFSKETTTLNTSSGREAKLKGIAFGCAFRISGPSVSGASFNGA 227

Query: 180 NGVMGLGRGPISFSTQLGKRFGNKFSYCLMDYTLSPPPTSFLMIGQAHD 34
           +GVMGLGRGPIS S+QLG RFGNKFSYCLMD+ +SP PTS+L+IG   +
Sbjct: 228 HGVMGLGRGPISLSSQLGHRFGNKFSYCLMDHDISPSPTSYLLIGSTQN 276


>ref|XP_004143702.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Cucumis sativus]
           gi|449529900|ref|XP_004171936.1| PREDICTED: aspartic
           proteinase nepenthesin-2-like [Cucumis sativus]
          Length = 459

 Score =  337 bits (864), Expect = 1e-90
 Identities = 164/225 (72%), Positives = 186/225 (82%), Gaps = 1/225 (0%)
 Frame = -2

Query: 717 SPLKSLHSDTSRLSILFSTLTNNPKSLKSPLVSGAPMGSGQYFVDFSIGTPPQKLLLVAD 538
           SP +SL SDT RLS+LFS    NP +LKSPL+SGA  GSGQYFVD  +GTPPQ LLLVAD
Sbjct: 50  SPSQSLSSDTHRLSLLFSR--PNP-TLKSPLISGASTGSGQYFVDIRLGTPPQSLLLVAD 106

Query: 537 TGSDLVWVKCSACKDCTKHLPGSFFFARHSSTFSPFHCYDRQCRLVPHS-EHVCNSTRLH 361
           TGSDLVWVKCSAC++C+ H P S F  RHSS+FSPFHC+D  CRL+PH+  H+CN TRLH
Sbjct: 107 TGSDLVWVKCSACRNCSHHPPSSAFLPRHSSSFSPFHCFDPHCRLLPHAPHHLCNHTRLH 166

Query: 360 SSCRYEYTYGDESKTSGFFSKETTTLNTSSGHEAKLRNLEFGCGFRVSGPSVSGSSFNGA 181
           S CR+ Y+Y D S +SGFFSKETTTL + SG E  L+ L FGCGFR+SGPSVSG+ FNGA
Sbjct: 167 SPCRFLYSYADGSLSSGFFSKETTTLKSLSGSEIHLKGLSFGCGFRISGPSVSGAQFNGA 226

Query: 180 NGVMGLGRGPISFSTQLGKRFGNKFSYCLMDYTLSPPPTSFLMIG 46
            GVMGLGRG ISFS+QLG+RFGNKFSYCLMDYTLSPPPTSFLMIG
Sbjct: 227 RGVMGLGRGSISFSSQLGRRFGNKFSYCLMDYTLSPPPTSFLMIG 271


>ref|NP_189198.1| aspartyl protease family protein [Arabidopsis thaliana]
           gi|11994761|dbj|BAB03090.1| chloroplast nucleoid DNA
           binding protein-like; nucellin-like protein [Arabidopsis
           thaliana] gi|189339286|gb|ACD89063.1| At3g25700
           [Arabidopsis thaliana] gi|332643533|gb|AEE77054.1|
           aspartyl protease family protein [Arabidopsis thaliana]
          Length = 452

 Score =  325 bits (832), Expect = 8e-87
 Identities = 158/235 (67%), Positives = 186/235 (79%), Gaps = 3/235 (1%)
 Frame = -2

Query: 717 SPLKSLHSDTSRLSILFSTLTNNP-KSLKSPLVSGAPMGSGQYFVDFSIGTPPQKLLLVA 541
           SP ++L  DT RL  L  +L   P   +KSP+VSGA  GSGQYFVD  IG PPQ LLL+A
Sbjct: 44  SPTQALALDTRRLHFL--SLRRKPIPFVKSPVVSGAASGSGQYFVDLRIGQPPQSLLLIA 101

Query: 540 DTGSDLVWVKCSACKDCTKHLPGSFFFARHSSTFSPFHCYDRQCRLVPHSEH--VCNSTR 367
           DTGSDLVWVKCSAC++C+ H P + FF RHSSTFSP HCYD  CRLVP  +   +CN TR
Sbjct: 102 DTGSDLVWVKCSACRNCSHHSPATVFFPRHSSTFSPAHCYDPVCRLVPKPDRAPICNHTR 161

Query: 366 LHSSCRYEYTYGDESKTSGFFSKETTTLNTSSGHEAKLRNLEFGCGFRVSGPSVSGSSFN 187
           +HS+C YEY Y D S TSG F++ETT+L TSSG EA+L+++ FGCGFR+SG SVSG+SFN
Sbjct: 162 IHSTCHYEYGYADGSLTSGLFARETTSLKTSSGKEARLKSVAFGCGFRISGQSVSGTSFN 221

Query: 186 GANGVMGLGRGPISFSTQLGKRFGNKFSYCLMDYTLSPPPTSFLMIGQAHDSESK 22
           GANGVMGLGRGPISF++QLG+RFGNKFSYCLMDYTLSPPPTS+L+IG   D  SK
Sbjct: 222 GANGVMGLGRGPISFASQLGRRFGNKFSYCLMDYTLSPPPTSYLIIGNGGDGISK 276


>ref|XP_002875271.1| hypothetical protein ARALYDRAFT_484331 [Arabidopsis lyrata subsp.
           lyrata] gi|297321109|gb|EFH51530.1| hypothetical protein
           ARALYDRAFT_484331 [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  323 bits (828), Expect = 2e-86
 Identities = 159/235 (67%), Positives = 185/235 (78%), Gaps = 3/235 (1%)
 Frame = -2

Query: 717 SPLKSLHSDTSRLSILFSTLTNNPKS-LKSPLVSGAPMGSGQYFVDFSIGTPPQKLLLVA 541
           SP ++L  DT RL  L  +L   P   +KSP+VSGA  GSGQYFVD  IG PPQ LLL+A
Sbjct: 43  SPTQALALDTRRLHFL--SLRRKPVPFVKSPVVSGASSGSGQYFVDLRIGQPPQSLLLIA 100

Query: 540 DTGSDLVWVKCSACKDCTKHLPGSFFFARHSSTFSPFHCYDRQCRLVPHSEHV--CNSTR 367
           DTGSDLVWVKCSAC++C+ H P + FF RHSSTFSP HCYD  CRLVP       CN TR
Sbjct: 101 DTGSDLVWVKCSACRNCSHHSPATVFFPRHSSTFSPAHCYDPVCRLVPKPGRAPRCNHTR 160

Query: 366 LHSSCRYEYTYGDESKTSGFFSKETTTLNTSSGHEAKLRNLEFGCGFRVSGPSVSGSSFN 187
           +HS+C YEY Y D S TSG F++ETT+L TSSG EAKL+++ FGCGFR+SG SVSG+SFN
Sbjct: 161 IHSTCPYEYGYADGSLTSGLFARETTSLKTSSGKEAKLKSVAFGCGFRISGQSVSGTSFN 220

Query: 186 GANGVMGLGRGPISFSTQLGKRFGNKFSYCLMDYTLSPPPTSFLMIGQAHDSESK 22
           GANGVMGLGRGPISF++QLG+RFGNKFSYCLMDYTLSPPPTS+L+IG   D+ SK
Sbjct: 221 GANGVMGLGRGPISFASQLGRRFGNKFSYCLMDYTLSPPPTSYLIIGDGGDAVSK 275


>ref|XP_002311432.1| predicted protein [Populus trichocarpa] gi|222851252|gb|EEE88799.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  318 bits (815), Expect = 7e-85
 Identities = 159/244 (65%), Positives = 190/244 (77%), Gaps = 8/244 (3%)
 Frame = -2

Query: 717 SPLKSLHSDTSRLSILFST----LTNNPKSLKSPLVSGAPMGSGQYFVDFSIGTPPQKLL 550
           +PL+SL SD  RLS+L  +      +   S KSPL+SGA  GSGQYFV   +G+PPQ LL
Sbjct: 38  TPLQSLSSDLQRLSLLHHSHHRHQNHRRTSSKSPLMSGASSGSGQYFVSIRLGSPPQTLL 97

Query: 549 LVADTGSDLVWVKCSACK-DCTKHLPGSFFFARHSSTFSPFHCYDRQCRLVPH-SEHVCN 376
           LVADTGSDL WV+CSACK +C+ H PGS F ARHS+TFSP HC+   C+LVP  + + CN
Sbjct: 98  LVADTGSDLTWVRCSACKTNCSIHPPGSTFLARHSTTFSPTHCFSSLCQLVPQPNPNPCN 157

Query: 375 STRLHSSCRYEYTYGDESKTSGFFSKETTTLNTSSGHEAKLRNLEFGCGFRVSGPSVSGS 196
            TRLHS+CRYEY Y D SKTSGFFSKETTTLNTSSG E KL+++ FGCGF  SGPS+ GS
Sbjct: 158 HTRLHSTCRYEYVYSDGSKTSGFFSKETTTLNTSSGREMKLKSIAFGCGFHASGPSLIGS 217

Query: 195 SFNGANGVMGLGRGPISFSTQLGKRFGNKFSYCLMDYTLSPPPTSFLMIGQ--AHDSESK 22
           SFNGA+GVMGLGRGPISF++QLG+RFG  FSYCL+DYTLSPPPTS+LMIG   +   ++K
Sbjct: 218 SFNGASGVMGLGRGPISFASQLGRRFGRSFSYCLLDYTLSPPPTSYLMIGDVVSTKKDNK 277

Query: 21  SIRS 10
           S+ S
Sbjct: 278 SMMS 281


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