BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031695
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    92   4e-17
emb|CBI35690.3| unnamed protein product [Vitis vinifera]               92   4e-17
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]    91   7e-17
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...    79   4e-13
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    75   4e-12

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/117 (47%), Positives = 78/117 (66%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   ILQRLSDVSYEDDAPEIPS-PDVSNYLMSEVNNAGEPEVIAFQDDTFGSN--KDPVRFEG 171
           +LQR+ ++SYEDD  +I S PDVSNYL+SE             DD   SN  +D   F+G
Sbjct: 397 LLQRIPEISYEDDIKDIRSAPDVSNYLVSE-------------DDASVSNGNRDQPCFDG 443

Query: 172 ISDVEVKRRLKEAIPAPLSVNDLNLRLA-PLQLAMATSANIISQPLSQGSLVPFHDK 339
           ++DVEV+R+LK+AI AP +V  L+ RL+ PLQ A+A S+ +  QP +QGS++PF +K
Sbjct: 444 MADVEVERKLKDAISAPSTVTSLDPRLSPPLQFAVAASSGLAPQPAAQGSIMPFSNK 500


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/117 (47%), Positives = 78/117 (66%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   ILQRLSDVSYEDDAPEIPS-PDVSNYLMSEVNNAGEPEVIAFQDDTFGSN--KDPVRFEG 171
           +LQR+ ++SYEDD  +I S PDVSNYL+SE             DD   SN  +D   F+G
Sbjct: 397 LLQRIPEISYEDDIKDIRSAPDVSNYLVSE-------------DDASVSNGNRDQPCFDG 443

Query: 172 ISDVEVKRRLKEAIPAPLSVNDLNLRLA-PLQLAMATSANIISQPLSQGSLVPFHDK 339
           ++DVEV+R+LK+AI AP +V  L+ RL+ PLQ A+A S+ +  QP +QGS++PF +K
Sbjct: 444 MADVEVERKLKDAISAPSTVTSLDPRLSPPLQFAVAASSGLAPQPAAQGSIMPFSNK 500


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/117 (46%), Positives = 78/117 (66%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   ILQRLSDVSYEDDAPEIPS-PDVSNYLMSEVNNAGEPEVIAFQDDTFGSN--KDPVRFEG 171
           +LQR+ ++SYED+  +I S PDVSNYL+SE             DD   SN  +D   F+G
Sbjct: 378 LLQRIPEISYEDBIKDIRSAPDVSNYLVSE-------------DDASVSNGNRDQPCFDG 424

Query: 172 ISDVEVKRRLKEAIPAPLSVNDLNLRLA-PLQLAMATSANIISQPLSQGSLVPFHDK 339
           ++DVEV+R+LK+AI AP +V  L+ RL+ PLQ A+A S+ +  QP +QGS++PF +K
Sbjct: 425 MADVEVERKLKDAISAPSTVTSLDPRLSPPLQFAVAASSGLAPQPAAQGSIMPFSNK 481


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223541695|gb|EEF43243.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 978

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 8/118 (6%)
 Frame = +1

Query: 1   ILQRLSDVSYEDDAPEIPSP-DVSNYLMSEVNNAGEPEVIAFQDDTFGSN--KDPVRFEG 171
           +LQR+ ++S+EDD  +IPSP DVSNYL+ E             DD F SN  +DP+ F+G
Sbjct: 419 LLQRIPEISFEDDMNDIPSPPDVSNYLVPE-------------DDAFTSNGNRDPLSFDG 465

Query: 172 ISDVEVKRRLKEAIPA----PLSVNDLNLRLA-PLQLAMATSANIISQPLSQGSLVPF 330
           ++D EV++RLKEAI      P +V +L+ RL  PLQ  MA+S++ I  P SQ ++V F
Sbjct: 466 MADAEVEKRLKEAISISSAFPSTVANLDARLVPPLQYTMASSSS-IPVPTSQPAVVTF 522


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
 Frame = +1

Query: 1   ILQRLSDVSYEDDAPEIPSP-DVSNYLMSEVNNAGEPEVIAFQDDTFGSNKDPVRFEGIS 177
           +LQ++  ++YEDD  ++PSP DVSNYL+SE + +               N+DP  F+G++
Sbjct: 402 LLQKIPQIAYEDDIKDVPSPPDVSNYLVSEDDGS-----------ISNGNRDPFLFDGMA 450

Query: 178 DVEVKRRLKEAIPA----PLSVNDLNLRLAPLQLAMATSANIISQPLSQGSLVPF 330
           D EV+R+LK+A+ A    P++  +L+ RL  LQ  M  S + +  P +Q S++PF
Sbjct: 451 DAEVERKLKDALAAASTFPVTTANLDPRLTSLQYTMVPSGS-VPPPTAQASMMPF 504