BLASTX nr result
ID: Coptis21_contig00031694
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00031694 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag... 57 7e-09 ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2... 54 1e-07 ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 54 1e-07 ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 54 1e-07 emb|CBI27769.3| unnamed protein product [Vitis vinifera] 54 1e-07 >ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] Length = 613 Score = 57.4 bits (137), Expect(2) = 7e-09 Identities = 26/30 (86%), Positives = 27/30 (90%) Frame = +1 Query: 124 LMVHEILQKLLHRFHWMVPGYGMCGESRSK 213 L VHEILQKLLHRFHW+VPGY M GESRSK Sbjct: 132 LQVHEILQKLLHRFHWIVPGYIMGGESRSK 161 Score = 27.3 bits (59), Expect(2) = 7e-09 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = +2 Query: 17 SLVNAATGTGKTI 55 +LVNAATGTGKTI Sbjct: 84 ALVNAATGTGKTI 96 >ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1| predicted protein [Populus trichocarpa] Length = 594 Score = 54.3 bits (129), Expect(2) = 1e-07 Identities = 24/30 (80%), Positives = 27/30 (90%) Frame = +1 Query: 124 LMVHEILQKLLHRFHWMVPGYGMCGESRSK 213 L V+EILQKLLHRFHW+VPGY M GE+RSK Sbjct: 110 LQVYEILQKLLHRFHWIVPGYVMGGENRSK 139 Score = 26.6 bits (57), Expect(2) = 1e-07 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 20 LVNAATGTGKTI 55 LVNAATGTGKT+ Sbjct: 63 LVNAATGTGKTV 74 >ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis vinifera] Length = 600 Score = 53.5 bits (127), Expect(2) = 1e-07 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = +1 Query: 124 LMVHEILQKLLHRFHWMVPGYGMCGESRSK 213 + V+EILQKLLHRFHW+VPGY M GE+RSK Sbjct: 119 MQVYEILQKLLHRFHWIVPGYVMGGENRSK 148 Score = 26.9 bits (58), Expect(2) = 1e-07 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 20 LVNAATGTGKTI 55 LVNAATGTGKTI Sbjct: 72 LVNAATGTGKTI 83 >ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 17-like [Glycine max] Length = 596 Score = 53.5 bits (127), Expect(2) = 1e-07 Identities = 24/30 (80%), Positives = 26/30 (86%) Frame = +1 Query: 124 LMVHEILQKLLHRFHWMVPGYGMCGESRSK 213 L V+EILQKLLHRFHW+VPGY M GE RSK Sbjct: 114 LQVYEILQKLLHRFHWIVPGYIMGGEKRSK 143 Score = 26.9 bits (58), Expect(2) = 1e-07 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = +2 Query: 17 SLVNAATGTGKTI 55 +LVNAATGTGKT+ Sbjct: 66 ALVNAATGTGKTV 78 >emb|CBI27769.3| unnamed protein product [Vitis vinifera] Length = 584 Score = 53.5 bits (127), Expect(2) = 1e-07 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = +1 Query: 124 LMVHEILQKLLHRFHWMVPGYGMCGESRSK 213 + V+EILQKLLHRFHW+VPGY M GE+RSK Sbjct: 119 MQVYEILQKLLHRFHWIVPGYVMGGENRSK 148 Score = 26.9 bits (58), Expect(2) = 1e-07 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 20 LVNAATGTGKTI 55 LVNAATGTGKTI Sbjct: 72 LVNAATGTGKTI 83