BLASTX nr result

ID: Coptis21_contig00031690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031690
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24067.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002266058.1| PREDICTED: microtubule-associated protein SP...   169   2e-40
ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, ...   169   2e-40
ref|NP_178730.2| armadillo/beta-catenin-like repeat-containing p...   141   6e-32
gb|AAC69120.1| hypothetical protein [Arabidopsis thaliana]            141   6e-32

>emb|CBI24067.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/123 (64%), Positives = 104/123 (84%)
 Frame = +2

Query: 2    FLCTGDLDSAFLEVLSSGDDLTLIELIDRTGPVLERLSPETVGEILSTLAVHFLDQRFLG 181
            FLC GD++SA++E L SGD+L L+EL+DRTGPVLE LS +TV +IL  LA +FL+QRF+ 
Sbjct: 704  FLCEGDIESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDILCILASYFLEQRFMN 763

Query: 182  SIIPWLQQVVDLSTTYGPGYLDLTSKARKEFLSAIQAAASMDFSNPADRRSIIQLALKLR 361
            S+IPWLQQVVDLST +GP YL L++KAR+EFLSA++ A +M+F NPA+RRS+ QLA+KL 
Sbjct: 764  SVIPWLQQVVDLSTIHGPNYLVLSAKARREFLSAVEEAVNMEFPNPAERRSVTQLAMKLH 823

Query: 362  QVW 370
            Q+W
Sbjct: 824  QLW 826


>ref|XP_002266058.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
            vinifera]
          Length = 838

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/123 (64%), Positives = 104/123 (84%)
 Frame = +2

Query: 2    FLCTGDLDSAFLEVLSSGDDLTLIELIDRTGPVLERLSPETVGEILSTLAVHFLDQRFLG 181
            FLC GD++SA++E L SGD+L L+EL+DRTGPVLE LS +TV +IL  LA +FL+QRF+ 
Sbjct: 704  FLCEGDIESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDILCILASYFLEQRFMN 763

Query: 182  SIIPWLQQVVDLSTTYGPGYLDLTSKARKEFLSAIQAAASMDFSNPADRRSIIQLALKLR 361
            S+IPWLQQVVDLST +GP YL L++KAR+EFLSA++ A +M+F NPA+RRS+ QLA+KL 
Sbjct: 764  SVIPWLQQVVDLSTIHGPNYLVLSAKARREFLSAVEEAVNMEFPNPAERRSVTQLAMKLH 823

Query: 362  QVW 370
            Q+W
Sbjct: 824  QLW 826


>ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
            communis] gi|223532788|gb|EEF34566.1|
            Microtubule-associated protein TORTIFOLIA1, putative
            [Ricinus communis]
          Length = 840

 Score =  169 bits (429), Expect = 2e-40
 Identities = 83/123 (67%), Positives = 104/123 (84%)
 Frame = +2

Query: 2    FLCTGDLDSAFLEVLSSGDDLTLIELIDRTGPVLERLSPETVGEILSTLAVHFLDQRFLG 181
            FLC GDLDSA++E L S D+L LIEL+DRTGPVLE LS +TV +IL+TLA +FL+QRF  
Sbjct: 709  FLCEGDLDSAYVEALCSTDELLLIELLDRTGPVLESLSHKTVSDILNTLASYFLEQRFTN 768

Query: 182  SIIPWLQQVVDLSTTYGPGYLDLTSKARKEFLSAIQAAASMDFSNPADRRSIIQLALKLR 361
            SI+PWLQQ+VDLST +GP YL L++KAR+EFLSAIQ AA+M+FSNPA+RRSI QL ++L 
Sbjct: 769  SIVPWLQQMVDLSTIHGPDYLVLSAKARREFLSAIQEAANMEFSNPAERRSITQLTMRLC 828

Query: 362  QVW 370
             +W
Sbjct: 829  HLW 831


>ref|NP_178730.2| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|330250943|gb|AEC06037.1|
            armadillo/beta-catenin-like repeat-containing protein
            [Arabidopsis thaliana]
          Length = 820

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/121 (55%), Positives = 94/121 (77%)
 Frame = +2

Query: 8    CTGDLDSAFLEVLSSGDDLTLIELIDRTGPVLERLSPETVGEILSTLAVHFLDQRFLGSI 187
            C   ++S +L+VLSSGD+L L+EL+DRTGPVLE +S +T+ EILS L  + L++RF+ SI
Sbjct: 696  CEDVVESEYLQVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRFMNSI 755

Query: 188  IPWLQQVVDLSTTYGPGYLDLTSKARKEFLSAIQAAASMDFSNPADRRSIIQLALKLRQV 367
            +PWL QV DLSTT G  YL  +++ R + LSAIQ A+ MDFSN A+RR++ Q+A+KLR++
Sbjct: 756  LPWLHQVADLSTTNGANYLIPSARKRAQVLSAIQEASGMDFSNLAERRAVTQIAMKLRKL 815

Query: 368  W 370
            W
Sbjct: 816  W 816


>gb|AAC69120.1| hypothetical protein [Arabidopsis thaliana]
          Length = 893

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/121 (55%), Positives = 94/121 (77%)
 Frame = +2

Query: 8    CTGDLDSAFLEVLSSGDDLTLIELIDRTGPVLERLSPETVGEILSTLAVHFLDQRFLGSI 187
            C   ++S +L+VLSSGD+L L+EL+DRTGPVLE +S +T+ EILS L  + L++RF+ SI
Sbjct: 696  CEDVVESEYLQVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRFMNSI 755

Query: 188  IPWLQQVVDLSTTYGPGYLDLTSKARKEFLSAIQAAASMDFSNPADRRSIIQLALKLRQV 367
            +PWL QV DLSTT G  YL  +++ R + LSAIQ A+ MDFSN A+RR++ Q+A+KLR++
Sbjct: 756  LPWLHQVADLSTTNGANYLIPSARKRAQVLSAIQEASGMDFSNLAERRAVTQIAMKLRKL 815

Query: 368  W 370
            W
Sbjct: 816  W 816


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