BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031687
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002514156.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat...   125   3e-27
ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat...   125   3e-27

>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/110 (65%), Positives = 89/110 (80%)
 Frame = -1

Query: 331 MKVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFI 152
           MK+GS+QDGCRVF++   +DL+SWN+LLSGFHD ++C  G +IF Q+L EGF PN YTFI
Sbjct: 477 MKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFI 536

Query: 151 SILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           SILRSCSSLSD+  G+Q+H  +VKNSLD + FVGTALVDMY+K   LE A
Sbjct: 537 SILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 586



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/105 (36%), Positives = 64/105 (60%)
 Frame = -1

Query: 316 IQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRS 137
           ++D   +F+ ++++DL +W  +++G+      ++  + F Q+  EG KPN +T  S L  
Sbjct: 583 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 642

Query: 136 CSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           CS ++ +  G+QLH   +K     D FV +ALVDMY+KCGC+E A
Sbjct: 643 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/104 (38%), Positives = 63/104 (60%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K GS    C+VF  +  +D+VSW +L++GF           +F ++  EG + N +T+ +
Sbjct: 175 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYAT 234

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCG 17
            L++CS   D+ FG+Q+H   +K    SD FVG+ALVD+Y+KCG
Sbjct: 235 ALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCG 278



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/104 (32%), Positives = 58/104 (55%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G +    RVF  M +Q+ VSWN+LL+GF      ++   +F ++       + +T  +
Sbjct: 276 KCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLST 335

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCG 17
           +L+ C++  ++R GQ +H   ++   + D F+   LVDMYSKCG
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCG 379



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/107 (28%), Positives = 56/107 (52%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G   D  +VF  +   D+VSW+++++        +   ++FK++   G  PN +T  S
Sbjct: 377 KCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLAS 436

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLE 8
           ++ + + L D+ +G+ +H  V K   + D  V  ALV MY K G ++
Sbjct: 437 LVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ 483


>ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|222872453|gb|EEF09584.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/110 (63%), Positives = 88/110 (80%)
 Frame = -1

Query: 331 MKVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFI 152
           MK   ++DG +VF++M   DLVSWN+LLSGF+D  +C RGP+IF Q+L+EGFKPN +TFI
Sbjct: 198 MKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFI 257

Query: 151 SILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           S+LRSCSSL D  FG+Q+H H++KNS D D FVGTALVDMY+K  CLE A
Sbjct: 258 SVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDA 307



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/109 (40%), Positives = 65/109 (59%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K   ++D    FD ++ +D+ SW  ++SG+   D  ++  + F+Q+  EG KPN YT  S
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
            L  CS ++ +  G+QLH   VK     D FVG+ALVD+Y KCGC+E A
Sbjct: 360 CLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHA 408



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/107 (28%), Positives = 62/107 (57%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G++ D  +VF  +   D+V+W+++++G       +   ++F  +  +G +PN +T  S
Sbjct: 98  KCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSS 157

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLE 8
           ++ + +++ D+R+GQ +HG + K   +SD  V   L+ MY K  C+E
Sbjct: 158 LVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVE 204



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/100 (33%), Positives = 60/100 (60%)
 Frame = -1

Query: 301 RVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRSCSSLS 122
           R+F  M  ++ VSWN+LL+G+      K+  ++F ++     K + +T  ++L+ C++  
Sbjct: 6   RLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65

Query: 121 DIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
            +R G+ LH   +++  + D F+G +LVDMYSKCG +  A
Sbjct: 66  SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA 105


>ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546612|gb|EEF48110.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 885

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/110 (60%), Positives = 88/110 (80%)
 Frame = -1

Query: 331 MKVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFI 152
           MK G +QDG RVFD+M  +DLVSWN+LLSGF+D ++  +G +IF Q+L+EG  PN YTF+
Sbjct: 442 MKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFV 501

Query: 151 SILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
            +LRSCSSL ++ FG+Q+H H++KNSLD + FVGTAL+DMY+K  CLE A
Sbjct: 502 GVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDA 551



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/105 (38%), Positives = 61/105 (58%)
 Frame = -1

Query: 316 IQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRS 137
           ++D    F+ +  +DL +W  +++G    D  ++  +   Q+L EG KPN +T  S L  
Sbjct: 548 LEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSG 607

Query: 136 CSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           CS ++ +  GQQLH   +K+    D FV +ALVDMY KCGC+E A
Sbjct: 608 CSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDA 652



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/109 (35%), Positives = 64/109 (58%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K GS+    +V   M  +D+VSW +L++G+        G + + ++  E   PN +T  +
Sbjct: 140 KCGSLAFARKVLVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLAT 199

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           +L++ S  SDI+FG+ +H   +K  L  D FVG+ALVD+Y+K G +E A
Sbjct: 200 VLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELA 248



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/104 (35%), Positives = 61/104 (58%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G ++   RVF  M  ++ VSWN+LL+G+      K   ++F ++L       NYT  +
Sbjct: 241 KFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLST 300

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCG 17
           +L+ C++  ++R G+ LH   ++ + + D F+G  LVDMYSKCG
Sbjct: 301 VLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCG 344



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/107 (27%), Positives = 61/107 (57%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G   +  +VF+ +   D+V+W+++++G       +   ++F  +  +G +PN ++F S
Sbjct: 342 KCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFAS 401

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLE 8
           ++ + +++ D+  GQ +H  + K   +SD  VG AL+ MY K G ++
Sbjct: 402 VISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQ 448


>ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/110 (53%), Positives = 78/110 (70%)
 Frame = -1

Query: 331 MKVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFI 152
           MK G + DG ++++SM+ +DL+SWN+ LSG HD     R   IF  +L EGF PN YTFI
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 151 SILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           SIL SCS L D+ +G+Q+H H++KN LD + FV TAL+DMY+KC  LE A
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/105 (40%), Positives = 64/105 (60%)
 Frame = -1

Query: 316 IQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRS 137
           ++D    F+ +  +DL +W  +++ +   +  ++    F+Q+  EG KPN +T    L  
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSG 626

Query: 136 CSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           CSSL+ +  GQQLH  V K+   SD FVG+ALVDMY+KCGC+E A
Sbjct: 627 CSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/104 (31%), Positives = 59/104 (56%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G I+   ++F  M  Q+ V+WN LL+G+          ++F  ++    K N +T  +
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCG 17
           +L+ C++  +++ GQ +H  ++K   + + F+G  LVDMYSKCG
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/99 (36%), Positives = 55/99 (55%)
 Frame = -1

Query: 298 VFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRSCSSLSD 119
           V   M  +D+VSW +L+ G            +F+++  EG  PN +T  + L++CS    
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMA 228

Query: 118 IRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           +  G+Q+H    K  L  D FVG+ALVD+Y+KCG +E A
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELA 267



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/106 (29%), Positives = 56/106 (52%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G   D   VF ++ + D+V W++L++        +   ++F  + +    PN YT  S
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCL 11
           +L + ++  ++++GQ +H  V K   ++D  V  ALV MY K GC+
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466


>ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/110 (53%), Positives = 78/110 (70%)
 Frame = -1

Query: 331 MKVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFI 152
           MK G + DG ++++SM+ +DL+SWN+ LSG HD     R   IF  +L EGF PN YTFI
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 151 SILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           SIL SCS L D+ +G+Q+H H++KN LD + FV TAL+DMY+KC  LE A
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/105 (40%), Positives = 64/105 (60%)
 Frame = -1

Query: 316 IQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRS 137
           ++D    F+ +  +DL +W  +++ +   +  ++    F+Q+  EG KPN +T    L  
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSG 626

Query: 136 CSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           CSSL+ +  GQQLH  V K+   SD FVG+ALVDMY+KCGC+E A
Sbjct: 627 CSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/104 (31%), Positives = 59/104 (56%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G I+   ++F  M  Q+ V+WN LL+G+          ++F  ++    K N +T  +
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCG 17
           +L+ C++  +++ GQ +H  ++K   + + F+G  LVDMYSKCG
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/99 (36%), Positives = 55/99 (55%)
 Frame = -1

Query: 298 VFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFISILRSCSSLSD 119
           V   M  +D+VSW +L+ G            +F+++  EG  PN +T  + L++CS    
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMA 228

Query: 118 IRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCLESA 2
           +  G+Q+H    K  L  D FVG+ALVD+Y+KCG +E A
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELA 267



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/106 (29%), Positives = 56/106 (52%)
 Frame = -1

Query: 328 KVGSIQDGCRVFDSMMRQDLVSWNSLLSGFHDGDSCKRGPQIFKQILVEGFKPNNYTFIS 149
           K G   D   VF ++ + D+V W++L++        +   ++F  + +    PN YT  S
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420

Query: 148 ILRSCSSLSDIRFGQQLHGHVVKNSLDSDGFVGTALVDMYSKCGCL 11
           +L + ++  ++++GQ +H  V K   ++D  V  ALV MY K GC+
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466